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Common risk variants for colorectal cancer: an evaluation of associations with age at cancer onset

Common genetic risk variants for colorectal cancer (CRC) have been identified at approximately 40 loci by genome-wide association studies (GWAS). We investigated the association of these risk variants by age at onset of CRC using case-only and case-control analysis. A total of 1,962 CRC cases and 2,...

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Autores principales: Song, Nan, Shin, Aesun, Park, Ji Won, Kim, Jeongseon, Oh, Jae Hwan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5233996/
https://www.ncbi.nlm.nih.gov/pubmed/28084440
http://dx.doi.org/10.1038/srep40644
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author Song, Nan
Shin, Aesun
Park, Ji Won
Kim, Jeongseon
Oh, Jae Hwan
author_facet Song, Nan
Shin, Aesun
Park, Ji Won
Kim, Jeongseon
Oh, Jae Hwan
author_sort Song, Nan
collection PubMed
description Common genetic risk variants for colorectal cancer (CRC) have been identified at approximately 40 loci by genome-wide association studies (GWAS). We investigated the association of these risk variants by age at onset of CRC using case-only and case-control analysis. A total of 1,962 CRC cases and 2,668 controls from two independent case-control studies conducted by Korea’s National Cancer Center were included in this study. We genotyped 33 GWAS-identified single-nucleotide polymorphisms (SNPs) associated with CRC risk. The risk allele in SNP rs704017, located at 10q22.3 in the ZMIZ1-AS1 gene, was consistently less frequent among CRC patients aged <50 years than among CRC patients aged ≥50 years in the case-only analysis (odds ratio (OR) = 0.78, 95% confidence interval (CI) = 0.66–0.92, P = 2.7 × 10(−3), in an additive model), although this did not surpass the threshold for multiple testing. The direction of associations between rs704017 and CRC risk differed by age group in the combined case-control analysis (<50 years: OR = 0.77, 95% CI = 0.60–0.98, P = 0.03 and ≥50 years: OR = 1.13, 95% CI = 0.98–1.29, P = 0.09, in a dominant model); the p-values for heterogeneity (P(heterogeneity) = 7.5 × 10(−3)) and for interaction were statistically significant (P(interaction) = 7.8 × 10(−3), in the dominant model). Our results suggest that the CRC susceptibility SNP rs704017 has a hereditary effect on onset age of CRC.
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spelling pubmed-52339962017-01-18 Common risk variants for colorectal cancer: an evaluation of associations with age at cancer onset Song, Nan Shin, Aesun Park, Ji Won Kim, Jeongseon Oh, Jae Hwan Sci Rep Article Common genetic risk variants for colorectal cancer (CRC) have been identified at approximately 40 loci by genome-wide association studies (GWAS). We investigated the association of these risk variants by age at onset of CRC using case-only and case-control analysis. A total of 1,962 CRC cases and 2,668 controls from two independent case-control studies conducted by Korea’s National Cancer Center were included in this study. We genotyped 33 GWAS-identified single-nucleotide polymorphisms (SNPs) associated with CRC risk. The risk allele in SNP rs704017, located at 10q22.3 in the ZMIZ1-AS1 gene, was consistently less frequent among CRC patients aged <50 years than among CRC patients aged ≥50 years in the case-only analysis (odds ratio (OR) = 0.78, 95% confidence interval (CI) = 0.66–0.92, P = 2.7 × 10(−3), in an additive model), although this did not surpass the threshold for multiple testing. The direction of associations between rs704017 and CRC risk differed by age group in the combined case-control analysis (<50 years: OR = 0.77, 95% CI = 0.60–0.98, P = 0.03 and ≥50 years: OR = 1.13, 95% CI = 0.98–1.29, P = 0.09, in a dominant model); the p-values for heterogeneity (P(heterogeneity) = 7.5 × 10(−3)) and for interaction were statistically significant (P(interaction) = 7.8 × 10(−3), in the dominant model). Our results suggest that the CRC susceptibility SNP rs704017 has a hereditary effect on onset age of CRC. Nature Publishing Group 2017-01-13 /pmc/articles/PMC5233996/ /pubmed/28084440 http://dx.doi.org/10.1038/srep40644 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Song, Nan
Shin, Aesun
Park, Ji Won
Kim, Jeongseon
Oh, Jae Hwan
Common risk variants for colorectal cancer: an evaluation of associations with age at cancer onset
title Common risk variants for colorectal cancer: an evaluation of associations with age at cancer onset
title_full Common risk variants for colorectal cancer: an evaluation of associations with age at cancer onset
title_fullStr Common risk variants for colorectal cancer: an evaluation of associations with age at cancer onset
title_full_unstemmed Common risk variants for colorectal cancer: an evaluation of associations with age at cancer onset
title_short Common risk variants for colorectal cancer: an evaluation of associations with age at cancer onset
title_sort common risk variants for colorectal cancer: an evaluation of associations with age at cancer onset
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5233996/
https://www.ncbi.nlm.nih.gov/pubmed/28084440
http://dx.doi.org/10.1038/srep40644
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