Cargando…
Rhea: a transparent and modular R pipeline for microbial profiling based on 16S rRNA gene amplicons
The importance of 16S rRNA gene amplicon profiles for understanding the influence of microbes in a variety of environments coupled with the steep reduction in sequencing costs led to a surge of microbial sequencing projects. The expanding crowd of scientists and clinicians wanting to make use of seq...
Autores principales: | Lagkouvardos, Ilias, Fischer, Sandra, Kumar, Neeraj, Clavel, Thomas |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5234437/ https://www.ncbi.nlm.nih.gov/pubmed/28097056 http://dx.doi.org/10.7717/peerj.2836 |
Ejemplares similares
-
Comparing bioinformatic pipelines for microbial 16S rRNA amplicon sequencing
por: Prodan, Andrei, et al.
Publicado: (2020) -
16S-FASAS: an integrated pipeline for synthetic full-length 16S rRNA gene sequencing data analysis
por: Zhang, Ke, et al.
Publicado: (2022) -
Cronos: A Machine Learning Pipeline for Description and Predictive Modeling of Microbial Communities Over Time
por: Litos, Aristeidis, et al.
Publicado: (2022) -
Handling of spurious sequences affects the outcome of high-throughput 16S rRNA gene amplicon profiling
por: Reitmeier, Sandra, et al.
Publicado: (2021) -
IMNGS: A comprehensive open resource of processed 16S rRNA microbial profiles for ecology and diversity studies
por: Lagkouvardos, Ilias, et al.
Publicado: (2016)