Cargando…

Nicotiana attenuata Data Hub (NaDH): an integrative platform for exploring genomic, transcriptomic and metabolomic data in wild tobacco

BACKGROUND: Nicotiana attenuata (coyote tobacco) is an ecological model for studying plant-environment interactions and plant gene function under real-world conditions. During the last decade, large amounts of genomic, transcriptomic and metabolomic data have been generated with this plant which has...

Descripción completa

Detalles Bibliográficos
Autores principales:	Brockmöller, Thomas, Ling, Zhihao, Li, Dapeng, Gaquerel, Emmanuel, Baldwin, Ian T., Xu, Shuqing
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2017
Materias:	Database
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5237228/ https://www.ncbi.nlm.nih.gov/pubmed/28086860 http://dx.doi.org/10.1186/s12864-016-3465-9

Ejemplares similares

Tissue Specific Diurnal Rhythms of Metabolites and Their Regulation during Herbivore Attack in a Native Tobacco, Nicotiana attenuata
por: Kim, Sang-Gyu, et al.
Publicado: (2011)

NaMYC2 transcription factor regulates a subset of plant defense responses in Nicotiana attenuata
por: Woldemariam, Melkamu G, et al.
Publicado: (2013)

The two α-dox genes of Nicotiana attenuata: overlapping but distinct functions in development and stress responses
por: Steppuhn, Anke, et al.
Publicado: (2010)

Diverting the Flux of the JA Pathway in Nicotiana attenuata Compromises the Plant's Defense Metabolism and Fitness in Nature and Glasshouse
por: Stitz, Michael, et al.
Publicado: (2011)

The complete mitochondrial genome sequence of an annual wild tobacco Nicotiana attenuata
por: Xu, Yiqing, et al.
Publicado: (2017)

Silencing an N-Acyltransferase-Like Involved in Lignin Biosynthesis in Nicotiana attenuata Dramatically Alters Herbivory-Induced Phenolamide Metabolism
por: Gaquerel, Emmanuel, et al.
Publicado: (2013)

Assembly and phylogenetic analysis of complete chloroplast genome of a wild tobacco Nicotiana Attenuata
por: Lin, Haifeng, et al.
Publicado: (2017)

Identification and characterization of circadian clock genes in a native tobacco, Nicotiana attenuata
por: Yon, Felipe, et al.
Publicado: (2012)

Opportunistic out-crossing in Nicotiana attenuata (Solanaceae), a predominantly self-fertilizing native tobacco
por: Sime, Karen R, et al.
Publicado: (2003)

Virus-Induced Gene Silencing Using Tobacco Rattle Virus as a Tool to Study the Interaction between Nicotiana attenuata and Rhizophagus irregularis
por: Groten, Karin, et al.
Publicado: (2015)

Specific decorations of 17-hydroxygeranyllinalool diterpene glycosides solve the autotoxicity problem of chemical defense in Nicotiana attenuata
por: Heiling, Sven, et al.
Publicado: (2021)

Complete chloroplast genome sequence of Coyote tobacco (Nicotiana attenuata, Solanaceae)
por: Poczai, Péter, et al.
Publicado: (2017)

Evolution of herbivore-induced early defense signaling was shaped by genome-wide duplications in Nicotiana
por: Zhou, Wenwu, et al.
Publicado: (2016)

In wild tobacco, Nicotiana attenuata, variation among bacterial communities of isogenic plants is mainly shaped by the local soil microbiota independently of the plants' capacity to produce jasmonic acid
por: Santhanam, Rakesh, et al.
Publicado: (2015)

Host-plant-mediated effects of Nadefensin on herbivore and pathogen resistance in Nicotiana attenuata
por: Rayapuram, Cbgowda, et al.
Publicado: (2008)

Natural variation in floral nectar proteins of two Nicotiana attenuata accessions
por: Seo, Pil Joon, et al.
Publicado: (2013)

Pectin methylesterase NaPME1 contributes to the emission of methanol during insect herbivory and to the elicitation of defence responses in Nicotiana attenuata
por: Körner, Evelyn, et al.
Publicado: (2009)

Cytokinin levels and signaling respond to wounding and the perception of herbivore elicitors in Nicotiana attenuata
por: Schäfer, Martin, et al.
Publicado: (2015)

A Jasmonate ZIM-Domain Protein NaJAZd Regulates Floral Jasmonic Acid Levels and Counteracts Flower Abscission in Nicotiana attenuata Plants
por: Oh, Youngjoo, et al.
Publicado: (2013)

microRNA390 modulates Nicotiana attenuata's tolerance response to Manduca sexta herbivory
por: Pradhan, Maitree, et al.
Publicado: (2021)

Herbivory-induced volatiles function as defenses increasing fitness of the native plant Nicotiana attenuata in nature
por: Schuman, Meredith C, et al.
Publicado: (2012)

Transcriptome profiling reveals differential gene expression of detoxification enzymes in a hemimetabolous tobacco pest after feeding on jasmonate-silenced Nicotiana attenuata plants
por: Crava, Cristina M., et al.
Publicado: (2016)

NaPDR1 and NaPDR1-like are essential for the resistance of Nicotiana attenuata against fungal pathogen Alternaria alternata
por: Xu, Zhen, et al.
Publicado: (2018)

Unbiased Transcriptional Comparisons of Generalist and Specialist Herbivores Feeding on Progressively Defenseless Nicotiana attenuata Plants
por: Govind, Geetha, et al.
Publicado: (2010)

Progressive 35S promoter methylation increases rapidly during vegetative development in transgenic Nicotiana attenuata plants
por: Weinhold, Arne, et al.
Publicado: (2013)

Involvement of NAC transcription factor NaNAC29 in Alternaria alternata resistance and leaf senescence in Nicotiana attenuata
por: Ma, Lan, et al.
Publicado: (2020)

Fitness benefits of trypsin proteinase inhibitor expression in Nicotiana attenuata are greater than their costs when plants are attacked.
por: Zavala, Jorge A, et al.
Publicado: (2004)

EWAS Data Hub: a resource of DNA methylation array data and metadata
por: Xiong, Zhuang, et al.
Publicado: (2020)

The Sesquiterpenes(E)-ß-Farnesene and (E)-α-Bergamotene Quench Ozone but Fail to Protect the Wild Tobacco Nicotiana attenuata from Ozone, UVB, and Drought Stresses
por: Palmer-Young, Evan C., et al.
Publicado: (2015)

Identification and profiling of miRNAs during herbivory reveals jasmonate-dependent and -independent patterns of accumulation in Nicotiana attenuata
por: Bozorov, Tohir A, et al.
Publicado: (2012)

Cytokinin transfer by a free-living mirid to Nicotiana attenuata recapitulates a strategy of endophytic insects
por: Brütting, Christoph, et al.
Publicado: (2018)

A simple and efficient micrografting method for stably transformed Nicotiana attenuata plants to examine shoot-root signaling
por: Fragoso, Variluska, et al.
Publicado: (2011)

BAK1 regulates the accumulation of jasmonic acid and the levels of trypsin proteinase inhibitors in Nicotiana attenuata's responses to herbivory
por: Yang, Da-Hai, et al.
Publicado: (2011)

ISSR and AFLP analysis of the temporal and spatial population structure of the post-fire annual, Nicotiana attenuata, in SW Utah
por: Bahulikar, Rahul A, et al.
Publicado: (2004)

MAPK-dependent JA and SA signalling in Nicotiana attenuata affects plant growth and fitness during competition with conspecifics
por: Meldau, Stefan, et al.
Publicado: (2012)

Label-free nanoUPLC-MS(E) based quantification of antimicrobial peptides from the leaf apoplast of Nicotiana attenuata
por: Weinhold, Arne, et al.
Publicado: (2015)

Differences in Nicotine Metabolism of Two Nicotiana attenuata Herbivores Render Them Differentially Susceptible to a Common Native Predator
por: Kumar, Pavan, et al.
Publicado: (2014)

Herbivore induction of jasmonic acid and chemical defences reduce photosynthesis in Nicotiana attenuata
por: Nabity, Paul D., et al.
Publicado: (2013)

Digestive Duet: Midgut Digestive Proteinases of Manduca sexta Ingesting Nicotiana attenuata with Manipulated Trypsin Proteinase Inhibitor Expression
por: Zavala, Jorge A., et al.
Publicado: (2008)

Nicotiana attenuata NaHD20 plays a role in leaf ABA accumulation during water stress, benzylacetone emission from flowers, and the timing of bolting and flower transitions
por: Ré, Delfina A., et al.
Publicado: (2011)

Cannot write session to /tmp/vufind_sessions/sess_m8gcd0m2o6tkrenqtt6jt1vk9v