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Use of sonic tomography to detect and quantify wood decay in living trees(1)
PREMISE OF THE STUDY: Field methodology and image analysis protocols using acoustic tomography were developed and evaluated as a tool to estimate the amount of internal decay and damage of living trees, with special attention to tropical rainforest trees with irregular trunk shapes. METHODS AND RESU...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5238698/ https://www.ncbi.nlm.nih.gov/pubmed/28101433 http://dx.doi.org/10.3732/apps.1600060 |
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author | Gilbert, Gregory S. Ballesteros, Javier O. Barrios-Rodriguez, Cesar A. Bonadies, Ernesto F. Cedeño-Sánchez, Marjorie L. Fossatti-Caballero, Nohely J. Trejos-Rodríguez, Mariam M. Pérez-Suñiga, José Moises Holub-Young, Katharine S. Henn, Laura A. W. Thompson, Jennifer B. García-López, Cesar G. Romo, Amanda C. Johnston, Daniel C. Barrick, Pablo P. Jordan, Fulvia A. Hershcovich, Shiran Russo, Natalie Sánchez, Juan David Fábrega, Juan Pablo Lumpkin, Raleigh McWilliams, Hunter A. Chester, Kathleen N. Burgos, Alana C. Wong, E. Beatriz Diab, Jonathan H. Renteria, Sonia A. Harrower, Jennifer T. Hooton, Douglas A. Glenn, Travis C. Faircloth, Brant C. Hubbell, Stephen P. |
author_facet | Gilbert, Gregory S. Ballesteros, Javier O. Barrios-Rodriguez, Cesar A. Bonadies, Ernesto F. Cedeño-Sánchez, Marjorie L. Fossatti-Caballero, Nohely J. Trejos-Rodríguez, Mariam M. Pérez-Suñiga, José Moises Holub-Young, Katharine S. Henn, Laura A. W. Thompson, Jennifer B. García-López, Cesar G. Romo, Amanda C. Johnston, Daniel C. Barrick, Pablo P. Jordan, Fulvia A. Hershcovich, Shiran Russo, Natalie Sánchez, Juan David Fábrega, Juan Pablo Lumpkin, Raleigh McWilliams, Hunter A. Chester, Kathleen N. Burgos, Alana C. Wong, E. Beatriz Diab, Jonathan H. Renteria, Sonia A. Harrower, Jennifer T. Hooton, Douglas A. Glenn, Travis C. Faircloth, Brant C. Hubbell, Stephen P. |
author_sort | Gilbert, Gregory S. |
collection | PubMed |
description | PREMISE OF THE STUDY: Field methodology and image analysis protocols using acoustic tomography were developed and evaluated as a tool to estimate the amount of internal decay and damage of living trees, with special attention to tropical rainforest trees with irregular trunk shapes. METHODS AND RESULTS: Living trunks of a diversity of tree species in tropical rainforests in the Republic of Panama were scanned using an Argus Electronic PiCUS 3 Sonic Tomograph and evaluated for the amount and patterns of internal decay. A protocol using ImageJ analysis software was used to quantify the proportions of intact and compromised wood. The protocols provide replicable estimates of internal decay and cavities for trees of varying shapes, wood density, and bark thickness. CONCLUSIONS: Sonic tomography, coupled with image analysis, provides an efficient, noninvasive approach to evaluate decay patterns and structural integrity of even irregularly shaped living trees. |
format | Online Article Text |
id | pubmed-5238698 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-52386982017-01-18 Use of sonic tomography to detect and quantify wood decay in living trees(1) Gilbert, Gregory S. Ballesteros, Javier O. Barrios-Rodriguez, Cesar A. Bonadies, Ernesto F. Cedeño-Sánchez, Marjorie L. Fossatti-Caballero, Nohely J. Trejos-Rodríguez, Mariam M. Pérez-Suñiga, José Moises Holub-Young, Katharine S. Henn, Laura A. W. Thompson, Jennifer B. García-López, Cesar G. Romo, Amanda C. Johnston, Daniel C. Barrick, Pablo P. Jordan, Fulvia A. Hershcovich, Shiran Russo, Natalie Sánchez, Juan David Fábrega, Juan Pablo Lumpkin, Raleigh McWilliams, Hunter A. Chester, Kathleen N. Burgos, Alana C. Wong, E. Beatriz Diab, Jonathan H. Renteria, Sonia A. Harrower, Jennifer T. Hooton, Douglas A. Glenn, Travis C. Faircloth, Brant C. Hubbell, Stephen P. Appl Plant Sci Protocol Note PREMISE OF THE STUDY: Field methodology and image analysis protocols using acoustic tomography were developed and evaluated as a tool to estimate the amount of internal decay and damage of living trees, with special attention to tropical rainforest trees with irregular trunk shapes. METHODS AND RESULTS: Living trunks of a diversity of tree species in tropical rainforests in the Republic of Panama were scanned using an Argus Electronic PiCUS 3 Sonic Tomograph and evaluated for the amount and patterns of internal decay. A protocol using ImageJ analysis software was used to quantify the proportions of intact and compromised wood. The protocols provide replicable estimates of internal decay and cavities for trees of varying shapes, wood density, and bark thickness. CONCLUSIONS: Sonic tomography, coupled with image analysis, provides an efficient, noninvasive approach to evaluate decay patterns and structural integrity of even irregularly shaped living trees. Botanical Society of America 2016-12-16 /pmc/articles/PMC5238698/ /pubmed/28101433 http://dx.doi.org/10.3732/apps.1600060 Text en © 2016 Gilbert et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Protocol Note Gilbert, Gregory S. Ballesteros, Javier O. Barrios-Rodriguez, Cesar A. Bonadies, Ernesto F. Cedeño-Sánchez, Marjorie L. Fossatti-Caballero, Nohely J. Trejos-Rodríguez, Mariam M. Pérez-Suñiga, José Moises Holub-Young, Katharine S. Henn, Laura A. W. Thompson, Jennifer B. García-López, Cesar G. Romo, Amanda C. Johnston, Daniel C. Barrick, Pablo P. Jordan, Fulvia A. Hershcovich, Shiran Russo, Natalie Sánchez, Juan David Fábrega, Juan Pablo Lumpkin, Raleigh McWilliams, Hunter A. Chester, Kathleen N. Burgos, Alana C. Wong, E. Beatriz Diab, Jonathan H. Renteria, Sonia A. Harrower, Jennifer T. Hooton, Douglas A. Glenn, Travis C. Faircloth, Brant C. Hubbell, Stephen P. Use of sonic tomography to detect and quantify wood decay in living trees(1) |
title | Use of sonic tomography to detect and quantify wood decay in living trees(1) |
title_full | Use of sonic tomography to detect and quantify wood decay in living trees(1) |
title_fullStr | Use of sonic tomography to detect and quantify wood decay in living trees(1) |
title_full_unstemmed | Use of sonic tomography to detect and quantify wood decay in living trees(1) |
title_short | Use of sonic tomography to detect and quantify wood decay in living trees(1) |
title_sort | use of sonic tomography to detect and quantify wood decay in living trees(1) |
topic | Protocol Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5238698/ https://www.ncbi.nlm.nih.gov/pubmed/28101433 http://dx.doi.org/10.3732/apps.1600060 |
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