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Data mining of molecular dynamics data reveals Li diffusion characteristics in garnet Li(7)La(3)Zr(2)O(12)

Understanding Li diffusion in solid conductors is essential for the next generation Li batteries. Here we show that density-based clustering of the trajectories computed using molecular dynamics simulations helps elucidate the Li diffusion mechanism within the Li(7)La(3)Zr(2)O(12) (LLZO) crystal lat...

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Autores principales: Chen, Chi, Lu, Ziheng, Ciucci, Francesco
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5240091/
https://www.ncbi.nlm.nih.gov/pubmed/28094317
http://dx.doi.org/10.1038/srep40769
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author Chen, Chi
Lu, Ziheng
Ciucci, Francesco
author_facet Chen, Chi
Lu, Ziheng
Ciucci, Francesco
author_sort Chen, Chi
collection PubMed
description Understanding Li diffusion in solid conductors is essential for the next generation Li batteries. Here we show that density-based clustering of the trajectories computed using molecular dynamics simulations helps elucidate the Li diffusion mechanism within the Li(7)La(3)Zr(2)O(12) (LLZO) crystal lattice. This unsupervised learning method recognizes lattice sites, is able to give the site type, and can identify Li hopping events. Results show that, while the cubic LLZO has a much higher hopping rate compared to its tetragonal counterpart, most of the Li hops in the cubic LLZO do not contribute to the diffusivity due to the dominance of back-and-forth type jumps. The hopping analysis and local Li configuration statistics give evidence that Li diffusivity in cubic LLZO is limited by the low vacancy concentration. The hopping statistics also shows uncorrelated Poisson-like diffusion for Li in the cubic LLZO, and correlated diffusion for Li in the tetragonal LLZO in the temporal scale. Further analysis of the spatio-temporal correlation using site-to-site mutual information confirms the weak site dependence of Li diffusion in the cubic LLZO as the origin for the uncorrelated diffusion. This work puts forward a perspective on combining machine learning and information theory to interpret results of molecular dynamics simulations.
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spelling pubmed-52400912017-01-23 Data mining of molecular dynamics data reveals Li diffusion characteristics in garnet Li(7)La(3)Zr(2)O(12) Chen, Chi Lu, Ziheng Ciucci, Francesco Sci Rep Article Understanding Li diffusion in solid conductors is essential for the next generation Li batteries. Here we show that density-based clustering of the trajectories computed using molecular dynamics simulations helps elucidate the Li diffusion mechanism within the Li(7)La(3)Zr(2)O(12) (LLZO) crystal lattice. This unsupervised learning method recognizes lattice sites, is able to give the site type, and can identify Li hopping events. Results show that, while the cubic LLZO has a much higher hopping rate compared to its tetragonal counterpart, most of the Li hops in the cubic LLZO do not contribute to the diffusivity due to the dominance of back-and-forth type jumps. The hopping analysis and local Li configuration statistics give evidence that Li diffusivity in cubic LLZO is limited by the low vacancy concentration. The hopping statistics also shows uncorrelated Poisson-like diffusion for Li in the cubic LLZO, and correlated diffusion for Li in the tetragonal LLZO in the temporal scale. Further analysis of the spatio-temporal correlation using site-to-site mutual information confirms the weak site dependence of Li diffusion in the cubic LLZO as the origin for the uncorrelated diffusion. This work puts forward a perspective on combining machine learning and information theory to interpret results of molecular dynamics simulations. Nature Publishing Group 2017-01-17 /pmc/articles/PMC5240091/ /pubmed/28094317 http://dx.doi.org/10.1038/srep40769 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Chen, Chi
Lu, Ziheng
Ciucci, Francesco
Data mining of molecular dynamics data reveals Li diffusion characteristics in garnet Li(7)La(3)Zr(2)O(12)
title Data mining of molecular dynamics data reveals Li diffusion characteristics in garnet Li(7)La(3)Zr(2)O(12)
title_full Data mining of molecular dynamics data reveals Li diffusion characteristics in garnet Li(7)La(3)Zr(2)O(12)
title_fullStr Data mining of molecular dynamics data reveals Li diffusion characteristics in garnet Li(7)La(3)Zr(2)O(12)
title_full_unstemmed Data mining of molecular dynamics data reveals Li diffusion characteristics in garnet Li(7)La(3)Zr(2)O(12)
title_short Data mining of molecular dynamics data reveals Li diffusion characteristics in garnet Li(7)La(3)Zr(2)O(12)
title_sort data mining of molecular dynamics data reveals li diffusion characteristics in garnet li(7)la(3)zr(2)o(12)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5240091/
https://www.ncbi.nlm.nih.gov/pubmed/28094317
http://dx.doi.org/10.1038/srep40769
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