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Sherpas share genetic variations with Tibetans for high‐altitude adaptation

BACKGROUND: Sherpas, a highlander population living in Khumbu region of Nepal, are well known for their superior climbing ability in Himalayas. However, the genetic basis of their adaptation to high‐altitude environments remains elusive. METHODS: We collected DNA samples of 582 Sherpas from Nepal an...

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Autores principales: Bhandari, Sushil, Zhang, Xiaoming, Cui, Chaoying, Yangla, Liu, Lan, Ouzhuluobu, Baimakangzhuo, Gonggalanzi, Bai, Caijuan, Bianba, Peng, Yi, Zhang, Hui, Xiang, Kun, Shi, Hong, Liu, Shiming, Gengdeng, Wu, Tianyi, Qi, Xuebin, Su, Bing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5241213/
https://www.ncbi.nlm.nih.gov/pubmed/28116332
http://dx.doi.org/10.1002/mgg3.264
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author Bhandari, Sushil
Zhang, Xiaoming
Cui, Chaoying
Yangla,
Liu, Lan
Ouzhuluobu,
Baimakangzhuo,
Gonggalanzi,
Bai, Caijuan
Bianba,
Peng, Yi
Zhang, Hui
Xiang, Kun
Shi, Hong
Liu, Shiming
Gengdeng,
Wu, Tianyi
Qi, Xuebin
Su, Bing
author_facet Bhandari, Sushil
Zhang, Xiaoming
Cui, Chaoying
Yangla,
Liu, Lan
Ouzhuluobu,
Baimakangzhuo,
Gonggalanzi,
Bai, Caijuan
Bianba,
Peng, Yi
Zhang, Hui
Xiang, Kun
Shi, Hong
Liu, Shiming
Gengdeng,
Wu, Tianyi
Qi, Xuebin
Su, Bing
author_sort Bhandari, Sushil
collection PubMed
description BACKGROUND: Sherpas, a highlander population living in Khumbu region of Nepal, are well known for their superior climbing ability in Himalayas. However, the genetic basis of their adaptation to high‐altitude environments remains elusive. METHODS: We collected DNA samples of 582 Sherpas from Nepal and Tibetan Autonomous Region of China, and we measured their hemoglobin levels and degrees of blood oxygen saturation. We genotyped 29 EPAS1 SNPs, two EGLN1 SNPs and the TED polymorphism (3.4 kb deletion) in Sherpas. We also performed genetic association analysis among these sequence variants with phenotypic data. RESULTS: We found similar allele frequencies on the tested 32 variants of these genes in Sherpas and Tibetans. Sherpa individuals carrying the derived alleles of EPAS1 (rs113305133, rs116611511 and rs12467821), EGLN1 (rs186996510 and rs12097901) and TED have lower hemoglobin levels when compared with those wild‐type allele carriers. Most of the EPAS1 variants showing significant association with hemoglobin levels in Tibetans were replicated in Sherpas. CONCLUSION: The shared sequence variants and hemoglobin trait between Sherpas and Tibetans indicate a shared genetic basis for high‐altitude adaptation, consistent with the proposal that Sherpas are in fact a recently derived population from Tibetans and they inherited adaptive variants for high‐altitude adaptation from their Tibetan ancestors.
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spelling pubmed-52412132017-01-23 Sherpas share genetic variations with Tibetans for high‐altitude adaptation Bhandari, Sushil Zhang, Xiaoming Cui, Chaoying Yangla, Liu, Lan Ouzhuluobu, Baimakangzhuo, Gonggalanzi, Bai, Caijuan Bianba, Peng, Yi Zhang, Hui Xiang, Kun Shi, Hong Liu, Shiming Gengdeng, Wu, Tianyi Qi, Xuebin Su, Bing Mol Genet Genomic Med Original Articles BACKGROUND: Sherpas, a highlander population living in Khumbu region of Nepal, are well known for their superior climbing ability in Himalayas. However, the genetic basis of their adaptation to high‐altitude environments remains elusive. METHODS: We collected DNA samples of 582 Sherpas from Nepal and Tibetan Autonomous Region of China, and we measured their hemoglobin levels and degrees of blood oxygen saturation. We genotyped 29 EPAS1 SNPs, two EGLN1 SNPs and the TED polymorphism (3.4 kb deletion) in Sherpas. We also performed genetic association analysis among these sequence variants with phenotypic data. RESULTS: We found similar allele frequencies on the tested 32 variants of these genes in Sherpas and Tibetans. Sherpa individuals carrying the derived alleles of EPAS1 (rs113305133, rs116611511 and rs12467821), EGLN1 (rs186996510 and rs12097901) and TED have lower hemoglobin levels when compared with those wild‐type allele carriers. Most of the EPAS1 variants showing significant association with hemoglobin levels in Tibetans were replicated in Sherpas. CONCLUSION: The shared sequence variants and hemoglobin trait between Sherpas and Tibetans indicate a shared genetic basis for high‐altitude adaptation, consistent with the proposal that Sherpas are in fact a recently derived population from Tibetans and they inherited adaptive variants for high‐altitude adaptation from their Tibetan ancestors. John Wiley and Sons Inc. 2016-11-23 /pmc/articles/PMC5241213/ /pubmed/28116332 http://dx.doi.org/10.1002/mgg3.264 Text en © 2016 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals, Inc. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Bhandari, Sushil
Zhang, Xiaoming
Cui, Chaoying
Yangla,
Liu, Lan
Ouzhuluobu,
Baimakangzhuo,
Gonggalanzi,
Bai, Caijuan
Bianba,
Peng, Yi
Zhang, Hui
Xiang, Kun
Shi, Hong
Liu, Shiming
Gengdeng,
Wu, Tianyi
Qi, Xuebin
Su, Bing
Sherpas share genetic variations with Tibetans for high‐altitude adaptation
title Sherpas share genetic variations with Tibetans for high‐altitude adaptation
title_full Sherpas share genetic variations with Tibetans for high‐altitude adaptation
title_fullStr Sherpas share genetic variations with Tibetans for high‐altitude adaptation
title_full_unstemmed Sherpas share genetic variations with Tibetans for high‐altitude adaptation
title_short Sherpas share genetic variations with Tibetans for high‐altitude adaptation
title_sort sherpas share genetic variations with tibetans for high‐altitude adaptation
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5241213/
https://www.ncbi.nlm.nih.gov/pubmed/28116332
http://dx.doi.org/10.1002/mgg3.264
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