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Germline miRNA DNA variants and the risk of colorectal cancer by subtype

MicroRNAs (miRNAs) regulate up to one‐third of all protein‐coding genes including genes relevant to cancer. Variants within miRNAs have been reported to be associated with prognosis, survival, response to chemotherapy across cancer types, in vitro parameters of cell growth, and altered risks for dev...

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Autores principales: Lindor, Noralane M., Larson, Melissa C., DeRycke, Melissa S., McDonnell, Shannon K., Baheti, Saurabh, Fogarty, Zachary C., Win, Aung Ko, Potter, John D., Buchanan, Daniel D., Clendenning, Mark, Newcomb, Polly A., Casey, Graham, Gallinger, Steven, Le Marchand, Loïc, Hopper, John L., Jenkins, Mark A., Goode, Ellen L., Thibodeau, Stephen N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5245119/
https://www.ncbi.nlm.nih.gov/pubmed/27636879
http://dx.doi.org/10.1002/gcc.22420
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author Lindor, Noralane M.
Larson, Melissa C.
DeRycke, Melissa S.
McDonnell, Shannon K.
Baheti, Saurabh
Fogarty, Zachary C.
Win, Aung Ko
Potter, John D.
Buchanan, Daniel D.
Clendenning, Mark
Newcomb, Polly A.
Casey, Graham
Gallinger, Steven
Le Marchand, Loïc
Hopper, John L.
Jenkins, Mark A.
Goode, Ellen L.
Thibodeau, Stephen N.
author_facet Lindor, Noralane M.
Larson, Melissa C.
DeRycke, Melissa S.
McDonnell, Shannon K.
Baheti, Saurabh
Fogarty, Zachary C.
Win, Aung Ko
Potter, John D.
Buchanan, Daniel D.
Clendenning, Mark
Newcomb, Polly A.
Casey, Graham
Gallinger, Steven
Le Marchand, Loïc
Hopper, John L.
Jenkins, Mark A.
Goode, Ellen L.
Thibodeau, Stephen N.
author_sort Lindor, Noralane M.
collection PubMed
description MicroRNAs (miRNAs) regulate up to one‐third of all protein‐coding genes including genes relevant to cancer. Variants within miRNAs have been reported to be associated with prognosis, survival, response to chemotherapy across cancer types, in vitro parameters of cell growth, and altered risks for development of cancer. Five miRNA variants have been reported to be associated with risk for development of colorectal cancer (CRC). In this study, we evaluated germline genetic variation in 1,123 miRNAs in 899 individuals with CRCs categorized by clinical subtypes and in 204 controls. The role of common miRNA variation in CRC was investigated using single variant and miRNA‐level association tests. Twenty‐nine miRNAs and 30 variants exhibited some marginal association with CRC in at least one subtype of CRC. Previously reported associations were not confirmed (n = 4) or could not be evaluated (n = 1). The variants noted for the CRCs with deficient mismatch repair showed little overlap with the variants noted for CRCs with proficient mismatch repair, consistent with our evolving understanding of the distinct biology underlying these two groups. © 2016 The Authors Genes, Chromosomes & Cancer Published by Wiley Periodicals, Inc.
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spelling pubmed-52451192017-02-01 Germline miRNA DNA variants and the risk of colorectal cancer by subtype Lindor, Noralane M. Larson, Melissa C. DeRycke, Melissa S. McDonnell, Shannon K. Baheti, Saurabh Fogarty, Zachary C. Win, Aung Ko Potter, John D. Buchanan, Daniel D. Clendenning, Mark Newcomb, Polly A. Casey, Graham Gallinger, Steven Le Marchand, Loïc Hopper, John L. Jenkins, Mark A. Goode, Ellen L. Thibodeau, Stephen N. Genes Chromosomes Cancer Research Articles MicroRNAs (miRNAs) regulate up to one‐third of all protein‐coding genes including genes relevant to cancer. Variants within miRNAs have been reported to be associated with prognosis, survival, response to chemotherapy across cancer types, in vitro parameters of cell growth, and altered risks for development of cancer. Five miRNA variants have been reported to be associated with risk for development of colorectal cancer (CRC). In this study, we evaluated germline genetic variation in 1,123 miRNAs in 899 individuals with CRCs categorized by clinical subtypes and in 204 controls. The role of common miRNA variation in CRC was investigated using single variant and miRNA‐level association tests. Twenty‐nine miRNAs and 30 variants exhibited some marginal association with CRC in at least one subtype of CRC. Previously reported associations were not confirmed (n = 4) or could not be evaluated (n = 1). The variants noted for the CRCs with deficient mismatch repair showed little overlap with the variants noted for CRCs with proficient mismatch repair, consistent with our evolving understanding of the distinct biology underlying these two groups. © 2016 The Authors Genes, Chromosomes & Cancer Published by Wiley Periodicals, Inc. John Wiley and Sons Inc. 2016-11-30 2017-03 /pmc/articles/PMC5245119/ /pubmed/27636879 http://dx.doi.org/10.1002/gcc.22420 Text en © 2016 The Authors Genes, Chromosomes & Cancer Published by Wiley Periodicals, Inc. This is an open access article under the terms of the Creative Commons Attribution‐NonCommercial‐NoDerivs (http://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Research Articles
Lindor, Noralane M.
Larson, Melissa C.
DeRycke, Melissa S.
McDonnell, Shannon K.
Baheti, Saurabh
Fogarty, Zachary C.
Win, Aung Ko
Potter, John D.
Buchanan, Daniel D.
Clendenning, Mark
Newcomb, Polly A.
Casey, Graham
Gallinger, Steven
Le Marchand, Loïc
Hopper, John L.
Jenkins, Mark A.
Goode, Ellen L.
Thibodeau, Stephen N.
Germline miRNA DNA variants and the risk of colorectal cancer by subtype
title Germline miRNA DNA variants and the risk of colorectal cancer by subtype
title_full Germline miRNA DNA variants and the risk of colorectal cancer by subtype
title_fullStr Germline miRNA DNA variants and the risk of colorectal cancer by subtype
title_full_unstemmed Germline miRNA DNA variants and the risk of colorectal cancer by subtype
title_short Germline miRNA DNA variants and the risk of colorectal cancer by subtype
title_sort germline mirna dna variants and the risk of colorectal cancer by subtype
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5245119/
https://www.ncbi.nlm.nih.gov/pubmed/27636879
http://dx.doi.org/10.1002/gcc.22420
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