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Synthetic redesign of Escherichia coli for cadaverine production from galactose

BACKGROUND: With increasing concerns over the environment, biological production of cadaverine has been suggested as an alternative route to replace polyamides generated from the petroleum-based process. For an ideal bioprocess, cadaverine should be produced with high yield and productivity from var...

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Autores principales: Kwak, Dong Hun, Lim, Hyun Gyu, Yang, Jina, Seo, Sang Woo, Jung, Gyoo Yeol
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5251296/
https://www.ncbi.nlm.nih.gov/pubmed/28127401
http://dx.doi.org/10.1186/s13068-017-0707-2
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author Kwak, Dong Hun
Lim, Hyun Gyu
Yang, Jina
Seo, Sang Woo
Jung, Gyoo Yeol
author_facet Kwak, Dong Hun
Lim, Hyun Gyu
Yang, Jina
Seo, Sang Woo
Jung, Gyoo Yeol
author_sort Kwak, Dong Hun
collection PubMed
description BACKGROUND: With increasing concerns over the environment, biological production of cadaverine has been suggested as an alternative route to replace polyamides generated from the petroleum-based process. For an ideal bioprocess, cadaverine should be produced with high yield and productivity from various sugars abundant in biomass. However, most microorganisms are not able to efficiently metabolize other biomass-derived sugars as fast as glucose. This results in reduced growth rate and low carbon flux toward the production of desired bio-chemicals. Thus, redesign of microorganisms is necessary for utilizing those carbon sources with enhanced carbon flux and product formation. RESULTS: In this study, we engineered Escherichia coli to produce cadaverine with rapid assimilation of galactose, a promising future feedstock. To achieve this, genes related to the metabolic pathway were maximally expressed to amplify the flux toward cadaverine production via synthetic expression cassettes consisting of predictive and quantitative genetic parts (promoters, 5′-untranslated regions, and terminators). Furthermore, the feedback inhibition of metabolic enzymes and degradation/re-uptake pathways was inactivated to robustly produce cadaverine. Finally, the resultant strain, DHK4, produced 8.80 g/L cadaverine with high yield (0.170 g/g) and productivity (0.293 g/L/h) during fed-batch fermentation, which was similar to or better than the previous glucose fermentation. CONCLUSIONS: Taken together, synthetic redesign of a microorganism with predictive and quantitative genetic parts is a prerequisite for converting sugars from abundant biomass into desired platform chemicals. This is the first report to produce cadaverine from galactose. Moreover, the yield (0.170 g/g) was the highest among engineered E. coli systems. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13068-017-0707-2) contains supplementary material, which is available to authorized users.
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spelling pubmed-52512962017-01-26 Synthetic redesign of Escherichia coli for cadaverine production from galactose Kwak, Dong Hun Lim, Hyun Gyu Yang, Jina Seo, Sang Woo Jung, Gyoo Yeol Biotechnol Biofuels Research BACKGROUND: With increasing concerns over the environment, biological production of cadaverine has been suggested as an alternative route to replace polyamides generated from the petroleum-based process. For an ideal bioprocess, cadaverine should be produced with high yield and productivity from various sugars abundant in biomass. However, most microorganisms are not able to efficiently metabolize other biomass-derived sugars as fast as glucose. This results in reduced growth rate and low carbon flux toward the production of desired bio-chemicals. Thus, redesign of microorganisms is necessary for utilizing those carbon sources with enhanced carbon flux and product formation. RESULTS: In this study, we engineered Escherichia coli to produce cadaverine with rapid assimilation of galactose, a promising future feedstock. To achieve this, genes related to the metabolic pathway were maximally expressed to amplify the flux toward cadaverine production via synthetic expression cassettes consisting of predictive and quantitative genetic parts (promoters, 5′-untranslated regions, and terminators). Furthermore, the feedback inhibition of metabolic enzymes and degradation/re-uptake pathways was inactivated to robustly produce cadaverine. Finally, the resultant strain, DHK4, produced 8.80 g/L cadaverine with high yield (0.170 g/g) and productivity (0.293 g/L/h) during fed-batch fermentation, which was similar to or better than the previous glucose fermentation. CONCLUSIONS: Taken together, synthetic redesign of a microorganism with predictive and quantitative genetic parts is a prerequisite for converting sugars from abundant biomass into desired platform chemicals. This is the first report to produce cadaverine from galactose. Moreover, the yield (0.170 g/g) was the highest among engineered E. coli systems. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13068-017-0707-2) contains supplementary material, which is available to authorized users. BioMed Central 2017-01-21 /pmc/articles/PMC5251296/ /pubmed/28127401 http://dx.doi.org/10.1186/s13068-017-0707-2 Text en © The Author(s) 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Kwak, Dong Hun
Lim, Hyun Gyu
Yang, Jina
Seo, Sang Woo
Jung, Gyoo Yeol
Synthetic redesign of Escherichia coli for cadaverine production from galactose
title Synthetic redesign of Escherichia coli for cadaverine production from galactose
title_full Synthetic redesign of Escherichia coli for cadaverine production from galactose
title_fullStr Synthetic redesign of Escherichia coli for cadaverine production from galactose
title_full_unstemmed Synthetic redesign of Escherichia coli for cadaverine production from galactose
title_short Synthetic redesign of Escherichia coli for cadaverine production from galactose
title_sort synthetic redesign of escherichia coli for cadaverine production from galactose
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5251296/
https://www.ncbi.nlm.nih.gov/pubmed/28127401
http://dx.doi.org/10.1186/s13068-017-0707-2
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