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Comparison of methods for estimating the attributable risk in the context of survival analysis

BACKGROUND: The attributable risk (AR) measures the proportion of disease cases that can be attributed to an exposure in the population. Several definitions and estimation methods have been proposed for survival data. METHODS: Using simulations, we compared four methods for estimating AR defined in...

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Autores principales: Gassama, Malamine, Bénichou, Jacques, Dartois, Laureen, Thiébaut, Anne C. M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5259851/
https://www.ncbi.nlm.nih.gov/pubmed/28114895
http://dx.doi.org/10.1186/s12874-016-0285-1
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author Gassama, Malamine
Bénichou, Jacques
Dartois, Laureen
Thiébaut, Anne C. M.
author_facet Gassama, Malamine
Bénichou, Jacques
Dartois, Laureen
Thiébaut, Anne C. M.
author_sort Gassama, Malamine
collection PubMed
description BACKGROUND: The attributable risk (AR) measures the proportion of disease cases that can be attributed to an exposure in the population. Several definitions and estimation methods have been proposed for survival data. METHODS: Using simulations, we compared four methods for estimating AR defined in terms of survival functions: two nonparametric methods based on Kaplan-Meier’s estimator, one semiparametric based on Cox’s model, and one parametric based on the piecewise constant hazards model, as well as one simpler method based on estimated exposure prevalence at baseline and Cox’s model hazard ratio. We considered a fixed binary exposure with varying exposure probabilities and strengths of association, and generated event times from a proportional hazards model with constant or monotonic (decreasing or increasing) Weibull baseline hazard, as well as from a nonproportional hazards model. We simulated 1,000 independent samples of size 1,000 or 10,000. The methods were compared in terms of mean bias, mean estimated standard error, empirical standard deviation and 95% confidence interval coverage probability at four equally spaced time points. RESULTS: Under proportional hazards, all five methods yielded unbiased results regardless of sample size. Nonparametric methods displayed greater variability than other approaches. All methods showed satisfactory coverage except for nonparametric methods at the end of follow-up for a sample size of 1,000 especially. With nonproportional hazards, nonparametric methods yielded similar results to those under proportional hazards, whereas semiparametric and parametric approaches that both relied on the proportional hazards assumption performed poorly. These methods were applied to estimate the AR of breast cancer due to menopausal hormone therapy in 38,359 women of the E3N cohort. CONCLUSION: In practice, our study suggests to use the semiparametric or parametric approaches to estimate AR as a function of time in cohort studies if the proportional hazards assumption appears appropriate. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12874-016-0285-1) contains supplementary material, which is available to authorized users.
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spelling pubmed-52598512017-01-26 Comparison of methods for estimating the attributable risk in the context of survival analysis Gassama, Malamine Bénichou, Jacques Dartois, Laureen Thiébaut, Anne C. M. BMC Med Res Methodol Research Article BACKGROUND: The attributable risk (AR) measures the proportion of disease cases that can be attributed to an exposure in the population. Several definitions and estimation methods have been proposed for survival data. METHODS: Using simulations, we compared four methods for estimating AR defined in terms of survival functions: two nonparametric methods based on Kaplan-Meier’s estimator, one semiparametric based on Cox’s model, and one parametric based on the piecewise constant hazards model, as well as one simpler method based on estimated exposure prevalence at baseline and Cox’s model hazard ratio. We considered a fixed binary exposure with varying exposure probabilities and strengths of association, and generated event times from a proportional hazards model with constant or monotonic (decreasing or increasing) Weibull baseline hazard, as well as from a nonproportional hazards model. We simulated 1,000 independent samples of size 1,000 or 10,000. The methods were compared in terms of mean bias, mean estimated standard error, empirical standard deviation and 95% confidence interval coverage probability at four equally spaced time points. RESULTS: Under proportional hazards, all five methods yielded unbiased results regardless of sample size. Nonparametric methods displayed greater variability than other approaches. All methods showed satisfactory coverage except for nonparametric methods at the end of follow-up for a sample size of 1,000 especially. With nonproportional hazards, nonparametric methods yielded similar results to those under proportional hazards, whereas semiparametric and parametric approaches that both relied on the proportional hazards assumption performed poorly. These methods were applied to estimate the AR of breast cancer due to menopausal hormone therapy in 38,359 women of the E3N cohort. CONCLUSION: In practice, our study suggests to use the semiparametric or parametric approaches to estimate AR as a function of time in cohort studies if the proportional hazards assumption appears appropriate. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12874-016-0285-1) contains supplementary material, which is available to authorized users. BioMed Central 2017-01-23 /pmc/articles/PMC5259851/ /pubmed/28114895 http://dx.doi.org/10.1186/s12874-016-0285-1 Text en © The Author(s) 2017 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Gassama, Malamine
Bénichou, Jacques
Dartois, Laureen
Thiébaut, Anne C. M.
Comparison of methods for estimating the attributable risk in the context of survival analysis
title Comparison of methods for estimating the attributable risk in the context of survival analysis
title_full Comparison of methods for estimating the attributable risk in the context of survival analysis
title_fullStr Comparison of methods for estimating the attributable risk in the context of survival analysis
title_full_unstemmed Comparison of methods for estimating the attributable risk in the context of survival analysis
title_short Comparison of methods for estimating the attributable risk in the context of survival analysis
title_sort comparison of methods for estimating the attributable risk in the context of survival analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5259851/
https://www.ncbi.nlm.nih.gov/pubmed/28114895
http://dx.doi.org/10.1186/s12874-016-0285-1
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