Cargando…

TEA: the epigenome platform for Arabidopsis methylome study

BACKGROUND: Bisulfite sequencing (BS-seq) has become a standard technology to profile genome-wide DNA methylation at single-base resolution. It allows researchers to conduct genome-wise cytosine methylation analyses on issues about genomic imprinting, transcriptional regulation, cellular development...

Descripción completa

Detalles Bibliográficos
Autores principales:	Su, Sheng-Yao, Chen, Shu-Hwa, Lu, I-Hsuan, Chiang, Yih-Shien, Wang, Yu-Bin, Chen, Pao-Yang, Lin, Chung-Yen
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2016
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5260138/ https://www.ncbi.nlm.nih.gov/pubmed/28155665 http://dx.doi.org/10.1186/s12864-016-3326-6

Ejemplares similares

Insights into Epigenome Evolution from Animal and Plant Methylomes
por: Yi, Soojin V
Publicado: (2017)

Human DNA methylomes of neurodegenerative diseases show common epigenomic patterns
por: Sanchez-Mut, J V, et al.
Publicado: (2016)

Single-base resolution methylomes of upland cotton (Gossypium hirsutum L.) reveal epigenome modifications in response to drought stress
por: Lu, Xuke, et al.
Publicado: (2017)

Resources for methylome analysis suitable for gene knockout studies of potential epigenome modifiers
por: Wilson, Gareth A, et al.
Publicado: (2012)

A Reference Methylome Database and Analysis Pipeline to Facilitate Integrative and Comparative Epigenomics
por: Song, Qiang, et al.
Publicado: (2013)

Development and application of an integrated allele-specific pipeline for methylomic and epigenomic analysis (MEA)
por: Richard Albert, Julien, et al.
Publicado: (2018)

Unique Features of the m(6)A Methylome in Arabidopsis thaliana
por: Luo, Guan-Zheng, et al.
Publicado: (2014)

Comparative Methylome Analysis Reveals Perturbation of Host Epigenome in Chestnut Blight Fungus by a Hypovirus
por: Li, Ru, et al.
Publicado: (2018)

TET-mediated epimutagenesis of the Arabidopsis thaliana methylome
por: Ji, Lexiang, et al.
Publicado: (2018)

Single-Cell DNA Methylome Sequencing and Bioinformatic Inference of Epigenomic Cell-State Dynamics
por: Farlik, Matthias, et al.
Publicado: (2015)

Unravelling the epigenomic interactions between parental inbreds resulting in an altered hybrid methylome in pigeonpea
por: Junaid, Alim, et al.
Publicado: (2018)

Comparative Epigenomic Profiling of the DNA Methylome in Mouse and Zebrafish Uncovers High Interspecies Divergence
por: Zhang, Chi, et al.
Publicado: (2016)

Synchronized long-read genome, methylome, epigenome, and transcriptome for resolving a Mendelian condition
por: Vollger, Mitchell R., et al.
Publicado: (2023)

Phenotypic and Methylome Responses to Salt Stress in Arabidopsis thaliana Natural Accessions
por: Lin, Xiaohe, et al.
Publicado: (2022)

Herbicide injury induces DNA methylome alterations in Arabidopsis
por: Kim, Gunjune, et al.
Publicado: (2017)

EpiMOLAS: an intuitive web-based framework for genome-wide DNA methylation analysis
por: Su, Sheng-Yao, et al.
Publicado: (2020)

Similarity between soybean and Arabidopsis seed methylomes and loss of non-CG methylation does not affect seed development
por: Lin, Jer-Young, et al.
Publicado: (2017)

Elegancy: Digitizing the wisdom from laboratories to the cloud with free no-code platform
por: Huang, Chih-Wei, et al.
Publicado: (2022)

Single‐base methylome analysis reveals dynamic epigenomic differences associated with water deficit in apple
por: Xu, Jidi, et al.
Publicado: (2017)

Cell lineage-specific methylome and genome alterations in gout
por: Tseng, Chia-Chun, et al.
Publicado: (2021)

Whole genome bisulfite sequencing methylome analysis of mulberry (Morus alba) reveals epigenome modifications in response to drought stress
por: Li, Ruixue, et al.
Publicado: (2020)

An epigenomic landscape of cervical intraepithelial neoplasia and cervical cancer using single‐base resolution methylome and hydroxymethylome
por: Han, Yingxin, et al.
Publicado: (2021)

Concerted genomic and epigenomic changes accompany stabilization of Arabidopsis allopolyploids
por: Jiang, Xinyu, et al.
Publicado: (2021)

Functional variation in allelic methylomes underscores a strong genetic contribution and reveals novel epigenetic alterations in the human epigenome
por: Cheung, Warren A., et al.
Publicado: (2017)

Systemic Investigation of Promoter-wide Methylome and Genome Variations in Gout
por: Tseng, Chia-Chun, et al.
Publicado: (2020)

DNA methylome analysis provides evidence that the expansion of the tea genome is linked to TE bursts
por: Wang, Lei, et al.
Publicado: (2018)

Advanced Methylome Analysis after Bisulfite Deep Sequencing: An Example in Arabidopsis
por: Dinh, Huy Q., et al.
Publicado: (2012)

Excess Light Priming in Arabidopsis thaliana Genotypes with Altered DNA Methylomes
por: Ganguly, Diep R., et al.
Publicado: (2019)

Single-base resolution of mouse offspring brain methylome reveals epigenome modifications caused by gestational folic acid
por: Barua, Subit, et al.
Publicado: (2014)

Correction to: Functional variation in allelic methylomes underscores a strong genetic contribution and reveals novel epigenetic alterations in the human epigenome
por: Cheung, Warren A., et al.
Publicado: (2019)

An integrated platform for bovine DNA methylome analysis suitable for small samples
por: Shojaei Saadi, Habib A, et al.
Publicado: (2014)

Comparative analyses of sperm DNA methylomes among human, mouse and cattle provide insights into epigenomic evolution and complex traits
por: Fang, Lingzhao, et al.
Publicado: (2019)

Learning from methylomes: epigenomic correlates of Populus balsamifera traits based on deep learning models of natural DNA methylation
por: Champigny, Marc J., et al.
Publicado: (2019)

Epigenome-Wide Association Study Reveals Methylation Loci Associated With Offspring Gestational Diabetes Mellitus Exposure and Maternal Methylome
por: Canouil, Mickaël, et al.
Publicado: (2021)

ePIANNO: ePIgenomics ANNOtation tool
por: Liu, Chia-Hsin, et al.
Publicado: (2016)

Century-scale Methylome Stability in a Recently Diverged Arabidopsis thaliana Lineage
por: Hagmann, Jörg, et al.
Publicado: (2015)

Epigenome-wide association meta-analysis of DNA methylation with coffee and tea consumption
por: Karabegović, Irma, et al.
Publicado: (2021)

Palindromic sequence impedes sequencing-by-ligation mechanism
por: Huang, Yu-Feng, et al.
Publicado: (2012)

Integrated Transcriptome Analysis and Single-Base Resolution Methylomes of Watermelon (Citrullus lanatus) Reveal Epigenome Modifications in Response to Osmotic Stress
por: Zhu, Fangming, et al.
Publicado: (2021)

Single-base resolution methylomes of somatic embryogenesis in Theobroma cacao L. reveal epigenome modifications associated with somatic embryo abnormalities
por: Garcia, Claudia, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_fcr7tfcab1gsji39q68ks0sf8r