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pELMO, an optimised in-house cloning vector

DNA cloning is an essential tool regarding DNA recombinant technology as it allows the replication of foreign DNA fragments within a cell. pELMO was here constructed as an in-house cloning vector for rapid and low-cost PCR product propagation; it is an optimally designed vector containing the ccdB k...

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Autores principales: Ramos, Andrea E., Muñoz, Marina, Moreno-Pérez, Darwin A., Patarroyo, Manuel A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5265227/
https://www.ncbi.nlm.nih.gov/pubmed/28116699
http://dx.doi.org/10.1186/s13568-017-0324-2
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author Ramos, Andrea E.
Muñoz, Marina
Moreno-Pérez, Darwin A.
Patarroyo, Manuel A.
author_facet Ramos, Andrea E.
Muñoz, Marina
Moreno-Pérez, Darwin A.
Patarroyo, Manuel A.
author_sort Ramos, Andrea E.
collection PubMed
description DNA cloning is an essential tool regarding DNA recombinant technology as it allows the replication of foreign DNA fragments within a cell. pELMO was here constructed as an in-house cloning vector for rapid and low-cost PCR product propagation; it is an optimally designed vector containing the ccdB killer gene from the pDONR 221 plasmid, cloned into the pUC18 vector’s multiple cloning site (Thermo Scientific). The ccdB killer gene has a cleavage site (CCC/GGG) for the SmaI restriction enzyme which is used for vector linearisation and cloning blunt-ended products. pELMO transformation efficiency was evaluated with different sized inserts and its cloning efficiency was compared to that of the pGEM-T Easy commercial vector. The highest pELMO transformation efficiency was observed for ~500 bp DNA fragments; pELMO vector had higher cloning efficiency for all insert sizes tested. In-house and commercial vector cloned insert reads after sequencing were similar thus highlighting that sequencing primers were designed and localised appropriately. pELMO is thus proposed as a practical alternative for in-house cloning of PCR products in molecular biology laboratories.
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spelling pubmed-52652272017-02-09 pELMO, an optimised in-house cloning vector Ramos, Andrea E. Muñoz, Marina Moreno-Pérez, Darwin A. Patarroyo, Manuel A. AMB Express Original Article DNA cloning is an essential tool regarding DNA recombinant technology as it allows the replication of foreign DNA fragments within a cell. pELMO was here constructed as an in-house cloning vector for rapid and low-cost PCR product propagation; it is an optimally designed vector containing the ccdB killer gene from the pDONR 221 plasmid, cloned into the pUC18 vector’s multiple cloning site (Thermo Scientific). The ccdB killer gene has a cleavage site (CCC/GGG) for the SmaI restriction enzyme which is used for vector linearisation and cloning blunt-ended products. pELMO transformation efficiency was evaluated with different sized inserts and its cloning efficiency was compared to that of the pGEM-T Easy commercial vector. The highest pELMO transformation efficiency was observed for ~500 bp DNA fragments; pELMO vector had higher cloning efficiency for all insert sizes tested. In-house and commercial vector cloned insert reads after sequencing were similar thus highlighting that sequencing primers were designed and localised appropriately. pELMO is thus proposed as a practical alternative for in-house cloning of PCR products in molecular biology laboratories. Springer Berlin Heidelberg 2017-01-24 /pmc/articles/PMC5265227/ /pubmed/28116699 http://dx.doi.org/10.1186/s13568-017-0324-2 Text en © The Author(s) 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Original Article
Ramos, Andrea E.
Muñoz, Marina
Moreno-Pérez, Darwin A.
Patarroyo, Manuel A.
pELMO, an optimised in-house cloning vector
title pELMO, an optimised in-house cloning vector
title_full pELMO, an optimised in-house cloning vector
title_fullStr pELMO, an optimised in-house cloning vector
title_full_unstemmed pELMO, an optimised in-house cloning vector
title_short pELMO, an optimised in-house cloning vector
title_sort pelmo, an optimised in-house cloning vector
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5265227/
https://www.ncbi.nlm.nih.gov/pubmed/28116699
http://dx.doi.org/10.1186/s13568-017-0324-2
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