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pELMO, an optimised in-house cloning vector
DNA cloning is an essential tool regarding DNA recombinant technology as it allows the replication of foreign DNA fragments within a cell. pELMO was here constructed as an in-house cloning vector for rapid and low-cost PCR product propagation; it is an optimally designed vector containing the ccdB k...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5265227/ https://www.ncbi.nlm.nih.gov/pubmed/28116699 http://dx.doi.org/10.1186/s13568-017-0324-2 |
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author | Ramos, Andrea E. Muñoz, Marina Moreno-Pérez, Darwin A. Patarroyo, Manuel A. |
author_facet | Ramos, Andrea E. Muñoz, Marina Moreno-Pérez, Darwin A. Patarroyo, Manuel A. |
author_sort | Ramos, Andrea E. |
collection | PubMed |
description | DNA cloning is an essential tool regarding DNA recombinant technology as it allows the replication of foreign DNA fragments within a cell. pELMO was here constructed as an in-house cloning vector for rapid and low-cost PCR product propagation; it is an optimally designed vector containing the ccdB killer gene from the pDONR 221 plasmid, cloned into the pUC18 vector’s multiple cloning site (Thermo Scientific). The ccdB killer gene has a cleavage site (CCC/GGG) for the SmaI restriction enzyme which is used for vector linearisation and cloning blunt-ended products. pELMO transformation efficiency was evaluated with different sized inserts and its cloning efficiency was compared to that of the pGEM-T Easy commercial vector. The highest pELMO transformation efficiency was observed for ~500 bp DNA fragments; pELMO vector had higher cloning efficiency for all insert sizes tested. In-house and commercial vector cloned insert reads after sequencing were similar thus highlighting that sequencing primers were designed and localised appropriately. pELMO is thus proposed as a practical alternative for in-house cloning of PCR products in molecular biology laboratories. |
format | Online Article Text |
id | pubmed-5265227 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-52652272017-02-09 pELMO, an optimised in-house cloning vector Ramos, Andrea E. Muñoz, Marina Moreno-Pérez, Darwin A. Patarroyo, Manuel A. AMB Express Original Article DNA cloning is an essential tool regarding DNA recombinant technology as it allows the replication of foreign DNA fragments within a cell. pELMO was here constructed as an in-house cloning vector for rapid and low-cost PCR product propagation; it is an optimally designed vector containing the ccdB killer gene from the pDONR 221 plasmid, cloned into the pUC18 vector’s multiple cloning site (Thermo Scientific). The ccdB killer gene has a cleavage site (CCC/GGG) for the SmaI restriction enzyme which is used for vector linearisation and cloning blunt-ended products. pELMO transformation efficiency was evaluated with different sized inserts and its cloning efficiency was compared to that of the pGEM-T Easy commercial vector. The highest pELMO transformation efficiency was observed for ~500 bp DNA fragments; pELMO vector had higher cloning efficiency for all insert sizes tested. In-house and commercial vector cloned insert reads after sequencing were similar thus highlighting that sequencing primers were designed and localised appropriately. pELMO is thus proposed as a practical alternative for in-house cloning of PCR products in molecular biology laboratories. Springer Berlin Heidelberg 2017-01-24 /pmc/articles/PMC5265227/ /pubmed/28116699 http://dx.doi.org/10.1186/s13568-017-0324-2 Text en © The Author(s) 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Original Article Ramos, Andrea E. Muñoz, Marina Moreno-Pérez, Darwin A. Patarroyo, Manuel A. pELMO, an optimised in-house cloning vector |
title | pELMO, an optimised in-house cloning vector |
title_full | pELMO, an optimised in-house cloning vector |
title_fullStr | pELMO, an optimised in-house cloning vector |
title_full_unstemmed | pELMO, an optimised in-house cloning vector |
title_short | pELMO, an optimised in-house cloning vector |
title_sort | pelmo, an optimised in-house cloning vector |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5265227/ https://www.ncbi.nlm.nih.gov/pubmed/28116699 http://dx.doi.org/10.1186/s13568-017-0324-2 |
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