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Metagenomic Analysis of Airborne Bacterial Community and Diversity in Seoul, Korea, during December 2014, Asian Dust Event
Asian dust or yellow sand events in East Asia are a major issue of environmental contamination and human health, causing increasing concern. A high amount of dust particles, especially called as particulate matter 10 (PM10), is transported by the wind from the arid and semi-arid tracks to the Korean...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5266312/ https://www.ncbi.nlm.nih.gov/pubmed/28122054 http://dx.doi.org/10.1371/journal.pone.0170693 |
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author | Cha, Seho Srinivasan, Sathiyaraj Jang, Jun Hyeong Lee, Dongwook Lim, Sora Kim, Kyung Sang Jheong, Weonhwa Lee, Dong-Won Park, Eung-Roh Chung, Hyun-Mi Choe, Joonho Kim, Myung Kyum Seo, Taegun |
author_facet | Cha, Seho Srinivasan, Sathiyaraj Jang, Jun Hyeong Lee, Dongwook Lim, Sora Kim, Kyung Sang Jheong, Weonhwa Lee, Dong-Won Park, Eung-Roh Chung, Hyun-Mi Choe, Joonho Kim, Myung Kyum Seo, Taegun |
author_sort | Cha, Seho |
collection | PubMed |
description | Asian dust or yellow sand events in East Asia are a major issue of environmental contamination and human health, causing increasing concern. A high amount of dust particles, especially called as particulate matter 10 (PM10), is transported by the wind from the arid and semi-arid tracks to the Korean peninsula, bringing a bacterial population that alters the terrestrial and atmospheric microbial communities. In this study, we aimed to explore the bacterial populations of Asian dust samples collected during November–December 2014. The dust samples were collected using the impinger method, and the hypervariable regions of the 16S rRNA gene were amplified using PCR followed by pyrosequencing. Analysis of the sequencing data were performed using Mothur software. The data showed that the number of operational taxonomic units and diversity index during Asian dust events were higher than those during non-Asian dust events. At the phylum level, the proportions of Proteobacteria, Actinobacteria, and Firmicutes were different between Asian dust and non-Asian dust samples. At the genus level, the proportions of the genus Bacillus (6.9%), Arthrobacter (3.6%), Blastocatella (2%), Planomicrobium (1.4%) were increased during Asian dust compared to those in non-Asian dust samples. This study showed that the significant relationship between bacterial populations of Asian dust samples and non-Asian dust samples in Korea, which could significantly affect the microbial population in the environment. |
format | Online Article Text |
id | pubmed-5266312 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-52663122017-02-17 Metagenomic Analysis of Airborne Bacterial Community and Diversity in Seoul, Korea, during December 2014, Asian Dust Event Cha, Seho Srinivasan, Sathiyaraj Jang, Jun Hyeong Lee, Dongwook Lim, Sora Kim, Kyung Sang Jheong, Weonhwa Lee, Dong-Won Park, Eung-Roh Chung, Hyun-Mi Choe, Joonho Kim, Myung Kyum Seo, Taegun PLoS One Research Article Asian dust or yellow sand events in East Asia are a major issue of environmental contamination and human health, causing increasing concern. A high amount of dust particles, especially called as particulate matter 10 (PM10), is transported by the wind from the arid and semi-arid tracks to the Korean peninsula, bringing a bacterial population that alters the terrestrial and atmospheric microbial communities. In this study, we aimed to explore the bacterial populations of Asian dust samples collected during November–December 2014. The dust samples were collected using the impinger method, and the hypervariable regions of the 16S rRNA gene were amplified using PCR followed by pyrosequencing. Analysis of the sequencing data were performed using Mothur software. The data showed that the number of operational taxonomic units and diversity index during Asian dust events were higher than those during non-Asian dust events. At the phylum level, the proportions of Proteobacteria, Actinobacteria, and Firmicutes were different between Asian dust and non-Asian dust samples. At the genus level, the proportions of the genus Bacillus (6.9%), Arthrobacter (3.6%), Blastocatella (2%), Planomicrobium (1.4%) were increased during Asian dust compared to those in non-Asian dust samples. This study showed that the significant relationship between bacterial populations of Asian dust samples and non-Asian dust samples in Korea, which could significantly affect the microbial population in the environment. Public Library of Science 2017-01-25 /pmc/articles/PMC5266312/ /pubmed/28122054 http://dx.doi.org/10.1371/journal.pone.0170693 Text en © 2017 Cha et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Cha, Seho Srinivasan, Sathiyaraj Jang, Jun Hyeong Lee, Dongwook Lim, Sora Kim, Kyung Sang Jheong, Weonhwa Lee, Dong-Won Park, Eung-Roh Chung, Hyun-Mi Choe, Joonho Kim, Myung Kyum Seo, Taegun Metagenomic Analysis of Airborne Bacterial Community and Diversity in Seoul, Korea, during December 2014, Asian Dust Event |
title | Metagenomic Analysis of Airborne Bacterial Community and Diversity in Seoul, Korea, during December 2014, Asian Dust Event |
title_full | Metagenomic Analysis of Airborne Bacterial Community and Diversity in Seoul, Korea, during December 2014, Asian Dust Event |
title_fullStr | Metagenomic Analysis of Airborne Bacterial Community and Diversity in Seoul, Korea, during December 2014, Asian Dust Event |
title_full_unstemmed | Metagenomic Analysis of Airborne Bacterial Community and Diversity in Seoul, Korea, during December 2014, Asian Dust Event |
title_short | Metagenomic Analysis of Airborne Bacterial Community and Diversity in Seoul, Korea, during December 2014, Asian Dust Event |
title_sort | metagenomic analysis of airborne bacterial community and diversity in seoul, korea, during december 2014, asian dust event |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5266312/ https://www.ncbi.nlm.nih.gov/pubmed/28122054 http://dx.doi.org/10.1371/journal.pone.0170693 |
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