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Sequence Analysis of Mitochondrial Genome of Toxascaris leonina from a South China Tiger

Toxascaris leonina is a common parasitic nematode of wild mammals and has significant impacts on the protection of rare wild animals. To analyze population genetic characteristics of T. leonina from South China tiger, its mitochondrial (mt) genome was sequenced. Its complete circular mt genome was 1...

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Autores principales: Li, Kangxin, Yang, Fang, Abdullahi, A. Y., Song, Meiran, Shi, Xianli, Wang, Minwei, Fu, Yeqi, Pan, Weida, Shan, Fang, Chen, Wu, Li, Guoqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Korean Society for Parasitology and Tropical Medicine 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5266358/
https://www.ncbi.nlm.nih.gov/pubmed/28095667
http://dx.doi.org/10.3347/kjp.2016.54.6.803
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author Li, Kangxin
Yang, Fang
Abdullahi, A. Y.
Song, Meiran
Shi, Xianli
Wang, Minwei
Fu, Yeqi
Pan, Weida
Shan, Fang
Chen, Wu
Li, Guoqing
author_facet Li, Kangxin
Yang, Fang
Abdullahi, A. Y.
Song, Meiran
Shi, Xianli
Wang, Minwei
Fu, Yeqi
Pan, Weida
Shan, Fang
Chen, Wu
Li, Guoqing
author_sort Li, Kangxin
collection PubMed
description Toxascaris leonina is a common parasitic nematode of wild mammals and has significant impacts on the protection of rare wild animals. To analyze population genetic characteristics of T. leonina from South China tiger, its mitochondrial (mt) genome was sequenced. Its complete circular mt genome was 14,277 bp in length, including 12 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 2 non-coding regions. The nucleotide composition was biased toward A and T. The most common start codon and stop codon were TTG and TAG, and 4 genes ended with an incomplete stop codon. There were 13 intergenic regions ranging 1 to 10 bp in size. Phylogenetically, T. leonina from a South China tiger was close to canine T. leonina. This study reports for the first time a complete mt genome sequence of T. leonina from the South China tiger, and provides a scientific basis for studying the genetic diversity of nematodes between different hosts.
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spelling pubmed-52663582017-01-26 Sequence Analysis of Mitochondrial Genome of Toxascaris leonina from a South China Tiger Li, Kangxin Yang, Fang Abdullahi, A. Y. Song, Meiran Shi, Xianli Wang, Minwei Fu, Yeqi Pan, Weida Shan, Fang Chen, Wu Li, Guoqing Korean J Parasitol Brief Communication Toxascaris leonina is a common parasitic nematode of wild mammals and has significant impacts on the protection of rare wild animals. To analyze population genetic characteristics of T. leonina from South China tiger, its mitochondrial (mt) genome was sequenced. Its complete circular mt genome was 14,277 bp in length, including 12 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 2 non-coding regions. The nucleotide composition was biased toward A and T. The most common start codon and stop codon were TTG and TAG, and 4 genes ended with an incomplete stop codon. There were 13 intergenic regions ranging 1 to 10 bp in size. Phylogenetically, T. leonina from a South China tiger was close to canine T. leonina. This study reports for the first time a complete mt genome sequence of T. leonina from the South China tiger, and provides a scientific basis for studying the genetic diversity of nematodes between different hosts. The Korean Society for Parasitology and Tropical Medicine 2016-12 2016-12-31 /pmc/articles/PMC5266358/ /pubmed/28095667 http://dx.doi.org/10.3347/kjp.2016.54.6.803 Text en Copyright © 2016 by The Korean Society for Parasitology and Tropical Medicine This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Brief Communication
Li, Kangxin
Yang, Fang
Abdullahi, A. Y.
Song, Meiran
Shi, Xianli
Wang, Minwei
Fu, Yeqi
Pan, Weida
Shan, Fang
Chen, Wu
Li, Guoqing
Sequence Analysis of Mitochondrial Genome of Toxascaris leonina from a South China Tiger
title Sequence Analysis of Mitochondrial Genome of Toxascaris leonina from a South China Tiger
title_full Sequence Analysis of Mitochondrial Genome of Toxascaris leonina from a South China Tiger
title_fullStr Sequence Analysis of Mitochondrial Genome of Toxascaris leonina from a South China Tiger
title_full_unstemmed Sequence Analysis of Mitochondrial Genome of Toxascaris leonina from a South China Tiger
title_short Sequence Analysis of Mitochondrial Genome of Toxascaris leonina from a South China Tiger
title_sort sequence analysis of mitochondrial genome of toxascaris leonina from a south china tiger
topic Brief Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5266358/
https://www.ncbi.nlm.nih.gov/pubmed/28095667
http://dx.doi.org/10.3347/kjp.2016.54.6.803
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