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Comprehensive Annotation of Mature Peptides and Genotypes for Zika Virus

The rapid spread of Zika virus (ZIKV) has caused much concern in the global health community, due in part to a link to fetal microcephaly and other neurological illnesses. While an increasing amount of ZIKV genomic sequence data is being generated, an understanding of the virus molecular biology is...

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Autores principales: Sun, Guangyu, Larsen, Christopher N., Baumgarth, Nicole, Klem, Edward B., Scheuermann, Richard H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5268401/
https://www.ncbi.nlm.nih.gov/pubmed/28125631
http://dx.doi.org/10.1371/journal.pone.0170462
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author Sun, Guangyu
Larsen, Christopher N.
Baumgarth, Nicole
Klem, Edward B.
Scheuermann, Richard H.
author_facet Sun, Guangyu
Larsen, Christopher N.
Baumgarth, Nicole
Klem, Edward B.
Scheuermann, Richard H.
author_sort Sun, Guangyu
collection PubMed
description The rapid spread of Zika virus (ZIKV) has caused much concern in the global health community, due in part to a link to fetal microcephaly and other neurological illnesses. While an increasing amount of ZIKV genomic sequence data is being generated, an understanding of the virus molecular biology is still greatly lacking. A significant step towards establishing ZIKV proteomics would be the compilation of all proteins produced by the virus, and the resultant virus genotypes. Here we report for the first time such data, using new computational methods for the annotation of mature peptide proteins, genotypes, and recombination events for all ZIKV genomes. The data is made publicly available through the Virus Pathogen Resource at www.viprbrc.org.
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spelling pubmed-52684012017-02-06 Comprehensive Annotation of Mature Peptides and Genotypes for Zika Virus Sun, Guangyu Larsen, Christopher N. Baumgarth, Nicole Klem, Edward B. Scheuermann, Richard H. PLoS One Research Article The rapid spread of Zika virus (ZIKV) has caused much concern in the global health community, due in part to a link to fetal microcephaly and other neurological illnesses. While an increasing amount of ZIKV genomic sequence data is being generated, an understanding of the virus molecular biology is still greatly lacking. A significant step towards establishing ZIKV proteomics would be the compilation of all proteins produced by the virus, and the resultant virus genotypes. Here we report for the first time such data, using new computational methods for the annotation of mature peptide proteins, genotypes, and recombination events for all ZIKV genomes. The data is made publicly available through the Virus Pathogen Resource at www.viprbrc.org. Public Library of Science 2017-01-26 /pmc/articles/PMC5268401/ /pubmed/28125631 http://dx.doi.org/10.1371/journal.pone.0170462 Text en © 2017 Sun et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Sun, Guangyu
Larsen, Christopher N.
Baumgarth, Nicole
Klem, Edward B.
Scheuermann, Richard H.
Comprehensive Annotation of Mature Peptides and Genotypes for Zika Virus
title Comprehensive Annotation of Mature Peptides and Genotypes for Zika Virus
title_full Comprehensive Annotation of Mature Peptides and Genotypes for Zika Virus
title_fullStr Comprehensive Annotation of Mature Peptides and Genotypes for Zika Virus
title_full_unstemmed Comprehensive Annotation of Mature Peptides and Genotypes for Zika Virus
title_short Comprehensive Annotation of Mature Peptides and Genotypes for Zika Virus
title_sort comprehensive annotation of mature peptides and genotypes for zika virus
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5268401/
https://www.ncbi.nlm.nih.gov/pubmed/28125631
http://dx.doi.org/10.1371/journal.pone.0170462
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