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Reverse Genetics and High Throughput Sequencing Methodologies for Plant Functional Genomics

In the post-genomic era, increasingly sophisticated genetic tools are being developed with the long-term goal of understanding how the coordinated activity of genes gives rise to a complex organism. With the advent of the next generation sequencing associated with effective computational approaches,...

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Autores principales: Ben-Amar, Anis, Daldoul, Samia, Reustle, Götz M., Krczal, Gabriele, Mliki, Ahmed
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Bentham Science Publishers 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5282599/
https://www.ncbi.nlm.nih.gov/pubmed/28217003
http://dx.doi.org/10.2174/1389202917666160520102827
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author Ben-Amar, Anis
Daldoul, Samia
Reustle, Götz M.
Krczal, Gabriele
Mliki, Ahmed
author_facet Ben-Amar, Anis
Daldoul, Samia
Reustle, Götz M.
Krczal, Gabriele
Mliki, Ahmed
author_sort Ben-Amar, Anis
collection PubMed
description In the post-genomic era, increasingly sophisticated genetic tools are being developed with the long-term goal of understanding how the coordinated activity of genes gives rise to a complex organism. With the advent of the next generation sequencing associated with effective computational approaches, wide variety of plant species have been fully sequenced giving a wealth of data sequence information on structure and organization of plant genomes. Since thousands of gene sequences are already known, recently developed functional genomics approaches provide powerful tools to analyze plant gene functions through various gene manipulation technologies. Integration of different omics platforms along with gene annotation and computational analysis may elucidate a complete view in a system biology level. Extensive investigations on reverse genetics methodologies were deployed for assigning biological function to a specific gene or gene product. We provide here an updated overview of these high throughout strategies highlighting recent advances in the knowledge of functional genomics in plants.
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spelling pubmed-52825992017-06-01 Reverse Genetics and High Throughput Sequencing Methodologies for Plant Functional Genomics Ben-Amar, Anis Daldoul, Samia Reustle, Götz M. Krczal, Gabriele Mliki, Ahmed Curr Genomics Article In the post-genomic era, increasingly sophisticated genetic tools are being developed with the long-term goal of understanding how the coordinated activity of genes gives rise to a complex organism. With the advent of the next generation sequencing associated with effective computational approaches, wide variety of plant species have been fully sequenced giving a wealth of data sequence information on structure and organization of plant genomes. Since thousands of gene sequences are already known, recently developed functional genomics approaches provide powerful tools to analyze plant gene functions through various gene manipulation technologies. Integration of different omics platforms along with gene annotation and computational analysis may elucidate a complete view in a system biology level. Extensive investigations on reverse genetics methodologies were deployed for assigning biological function to a specific gene or gene product. We provide here an updated overview of these high throughout strategies highlighting recent advances in the knowledge of functional genomics in plants. Bentham Science Publishers 2016-12 2016-12 /pmc/articles/PMC5282599/ /pubmed/28217003 http://dx.doi.org/10.2174/1389202917666160520102827 Text en ©2016 Bentham Science Publishers https://creativecommons.org/licenses/by-nc/4.0/legalcode This is an open access article licensed under the terms of the Creative Commons Attribution-Non-Commercial 4.0 International Public License (CC BY-NC 4.0) (https://creativecommons.org/licenses/by-nc/4.0/legalcode), which permits unrestricted, non-commercial use, distribution and reproduction in any medium, provided the work is properly cited.
spellingShingle Article
Ben-Amar, Anis
Daldoul, Samia
Reustle, Götz M.
Krczal, Gabriele
Mliki, Ahmed
Reverse Genetics and High Throughput Sequencing Methodologies for Plant Functional Genomics
title Reverse Genetics and High Throughput Sequencing Methodologies for Plant Functional Genomics
title_full Reverse Genetics and High Throughput Sequencing Methodologies for Plant Functional Genomics
title_fullStr Reverse Genetics and High Throughput Sequencing Methodologies for Plant Functional Genomics
title_full_unstemmed Reverse Genetics and High Throughput Sequencing Methodologies for Plant Functional Genomics
title_short Reverse Genetics and High Throughput Sequencing Methodologies for Plant Functional Genomics
title_sort reverse genetics and high throughput sequencing methodologies for plant functional genomics
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5282599/
https://www.ncbi.nlm.nih.gov/pubmed/28217003
http://dx.doi.org/10.2174/1389202917666160520102827
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