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Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers
The genetic diversity of 175 rice accessions from Myanmar, including landraces and improved types from upland and lowland ecosystems in five different areas—Western (hilly), Northern (mountainous), North and South-eastern (plateau), and Southern (plain)—was evaluated on the basis of polymorphism dat...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Japanese Society of Breeding
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5282748/ https://www.ncbi.nlm.nih.gov/pubmed/28163592 http://dx.doi.org/10.1270/jsbbs.16033 |
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author | Wunna, Watanabe, Kazuo N. Ohsawa, Ryo Obara, Mitsuhiro Yanagihara, Seiji Aung, Pa Pa Fukuta, Yoshimichi |
author_facet | Wunna, Watanabe, Kazuo N. Ohsawa, Ryo Obara, Mitsuhiro Yanagihara, Seiji Aung, Pa Pa Fukuta, Yoshimichi |
author_sort | Wunna, |
collection | PubMed |
description | The genetic diversity of 175 rice accessions from Myanmar, including landraces and improved types from upland and lowland ecosystems in five different areas—Western (hilly), Northern (mountainous), North and South-eastern (plateau), and Southern (plain)—was evaluated on the basis of polymorphism data for 65 DNA markers and phenol reactions. On the basis of the DNA polymorphism data, high genetic diversity was confirmed to conserve in the accessions from each ecosystem and area. And the accessions were classified into two cluster groups I and II, which corresponded to Indica Group and Japonica Group, respectively. Cluster group I accessions were distributed mainly in upland ecosystems; group II were distributed in lowland in the Southern area, and the distributions of dominant groups differed among areas. Rice germplasm in Myanmar has maintained high genetic diversity among ecosystems and areas. This information will be used for advanced studies in germplasm and rice breeding in Myanmar. |
format | Online Article Text |
id | pubmed-5282748 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Japanese Society of Breeding |
record_format | MEDLINE/PubMed |
spelling | pubmed-52827482017-02-03 Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers Wunna, Watanabe, Kazuo N. Ohsawa, Ryo Obara, Mitsuhiro Yanagihara, Seiji Aung, Pa Pa Fukuta, Yoshimichi Breed Sci Research Paper The genetic diversity of 175 rice accessions from Myanmar, including landraces and improved types from upland and lowland ecosystems in five different areas—Western (hilly), Northern (mountainous), North and South-eastern (plateau), and Southern (plain)—was evaluated on the basis of polymorphism data for 65 DNA markers and phenol reactions. On the basis of the DNA polymorphism data, high genetic diversity was confirmed to conserve in the accessions from each ecosystem and area. And the accessions were classified into two cluster groups I and II, which corresponded to Indica Group and Japonica Group, respectively. Cluster group I accessions were distributed mainly in upland ecosystems; group II were distributed in lowland in the Southern area, and the distributions of dominant groups differed among areas. Rice germplasm in Myanmar has maintained high genetic diversity among ecosystems and areas. This information will be used for advanced studies in germplasm and rice breeding in Myanmar. Japanese Society of Breeding 2016-12 2016-11-17 /pmc/articles/PMC5282748/ /pubmed/28163592 http://dx.doi.org/10.1270/jsbbs.16033 Text en Copyright © 2016 by JAPANESE SOCIETY OF BREEDING http://creativecommons.org/licenses/by-nc-nd/3.0 This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Paper Wunna, Watanabe, Kazuo N. Ohsawa, Ryo Obara, Mitsuhiro Yanagihara, Seiji Aung, Pa Pa Fukuta, Yoshimichi Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers |
title | Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers |
title_full | Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers |
title_fullStr | Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers |
title_full_unstemmed | Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers |
title_short | Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers |
title_sort | genetic variation of rice (oryza sativa l.) germplasm in myanmar based on genomic compositions of dna markers |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5282748/ https://www.ncbi.nlm.nih.gov/pubmed/28163592 http://dx.doi.org/10.1270/jsbbs.16033 |
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