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Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers

The genetic diversity of 175 rice accessions from Myanmar, including landraces and improved types from upland and lowland ecosystems in five different areas—Western (hilly), Northern (mountainous), North and South-eastern (plateau), and Southern (plain)—was evaluated on the basis of polymorphism dat...

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Autores principales: Wunna, Watanabe, Kazuo N., Ohsawa, Ryo, Obara, Mitsuhiro, Yanagihara, Seiji, Aung, Pa Pa, Fukuta, Yoshimichi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Japanese Society of Breeding 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5282748/
https://www.ncbi.nlm.nih.gov/pubmed/28163592
http://dx.doi.org/10.1270/jsbbs.16033
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author Wunna,
Watanabe, Kazuo N.
Ohsawa, Ryo
Obara, Mitsuhiro
Yanagihara, Seiji
Aung, Pa Pa
Fukuta, Yoshimichi
author_facet Wunna,
Watanabe, Kazuo N.
Ohsawa, Ryo
Obara, Mitsuhiro
Yanagihara, Seiji
Aung, Pa Pa
Fukuta, Yoshimichi
author_sort Wunna,
collection PubMed
description The genetic diversity of 175 rice accessions from Myanmar, including landraces and improved types from upland and lowland ecosystems in five different areas—Western (hilly), Northern (mountainous), North and South-eastern (plateau), and Southern (plain)—was evaluated on the basis of polymorphism data for 65 DNA markers and phenol reactions. On the basis of the DNA polymorphism data, high genetic diversity was confirmed to conserve in the accessions from each ecosystem and area. And the accessions were classified into two cluster groups I and II, which corresponded to Indica Group and Japonica Group, respectively. Cluster group I accessions were distributed mainly in upland ecosystems; group II were distributed in lowland in the Southern area, and the distributions of dominant groups differed among areas. Rice germplasm in Myanmar has maintained high genetic diversity among ecosystems and areas. This information will be used for advanced studies in germplasm and rice breeding in Myanmar.
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spelling pubmed-52827482017-02-03 Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers Wunna, Watanabe, Kazuo N. Ohsawa, Ryo Obara, Mitsuhiro Yanagihara, Seiji Aung, Pa Pa Fukuta, Yoshimichi Breed Sci Research Paper The genetic diversity of 175 rice accessions from Myanmar, including landraces and improved types from upland and lowland ecosystems in five different areas—Western (hilly), Northern (mountainous), North and South-eastern (plateau), and Southern (plain)—was evaluated on the basis of polymorphism data for 65 DNA markers and phenol reactions. On the basis of the DNA polymorphism data, high genetic diversity was confirmed to conserve in the accessions from each ecosystem and area. And the accessions were classified into two cluster groups I and II, which corresponded to Indica Group and Japonica Group, respectively. Cluster group I accessions were distributed mainly in upland ecosystems; group II were distributed in lowland in the Southern area, and the distributions of dominant groups differed among areas. Rice germplasm in Myanmar has maintained high genetic diversity among ecosystems and areas. This information will be used for advanced studies in germplasm and rice breeding in Myanmar. Japanese Society of Breeding 2016-12 2016-11-17 /pmc/articles/PMC5282748/ /pubmed/28163592 http://dx.doi.org/10.1270/jsbbs.16033 Text en Copyright © 2016 by JAPANESE SOCIETY OF BREEDING http://creativecommons.org/licenses/by-nc-nd/3.0 This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Paper
Wunna,
Watanabe, Kazuo N.
Ohsawa, Ryo
Obara, Mitsuhiro
Yanagihara, Seiji
Aung, Pa Pa
Fukuta, Yoshimichi
Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers
title Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers
title_full Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers
title_fullStr Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers
title_full_unstemmed Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers
title_short Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers
title_sort genetic variation of rice (oryza sativa l.) germplasm in myanmar based on genomic compositions of dna markers
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5282748/
https://www.ncbi.nlm.nih.gov/pubmed/28163592
http://dx.doi.org/10.1270/jsbbs.16033
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