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ADAM23 is a common risk gene for canine idiopathic epilepsy
BACKGROUND: Idiopathic or genetic adult-onset epilepsy is a common neurological disorder in domestic dogs. Genetic association has been reported only with ADAM23 on CFA 37 in few breeds. To identify novel epilepsy genes, we performed genome-wide association (GWA) analyses in four new breeds, and inv...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5282852/ https://www.ncbi.nlm.nih.gov/pubmed/28143391 http://dx.doi.org/10.1186/s12863-017-0478-6 |
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author | Koskinen, Lotta L. E. Seppälä, Eija H. Weissl, Jutta Jokinen, Tarja S. Viitmaa, Ranno Hänninen, Reetta L. Quignon, Pascale Fischer, Andrea André, Catherine Lohi, Hannes |
author_facet | Koskinen, Lotta L. E. Seppälä, Eija H. Weissl, Jutta Jokinen, Tarja S. Viitmaa, Ranno Hänninen, Reetta L. Quignon, Pascale Fischer, Andrea André, Catherine Lohi, Hannes |
author_sort | Koskinen, Lotta L. E. |
collection | PubMed |
description | BACKGROUND: Idiopathic or genetic adult-onset epilepsy is a common neurological disorder in domestic dogs. Genetic association has been reported only with ADAM23 on CFA 37 in few breeds. To identify novel epilepsy genes, we performed genome-wide association (GWA) analyses in four new breeds, and investigated the association of the previously reported ADAM23 haplotype with the epilepsy phenotype in eight breeds. RESULTS: GWA analysis did not reveal new epilepsy loci. ADAM23 association (p < 0.05) was identified in five breeds. Combined analysis of all eight breeds showed significant association (p = 4.6e(−6), OR 1.9). CONCLUSIONS: Our results further support the role of ADAM23 in multiple breeds as a common risk gene for epilepsy with low penetrance. The lack of findings in the GWA analyses points towards inefficient capture of genetic variation by the current SNP arrays, causal variant(s) with low penetrance and possible phenocopies. Future work will include studies on ADAM23 function and expression in canine neurons, as well as whole-genome sequencing in order to identify additional IE genes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12863-017-0478-6) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5282852 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-52828522017-02-03 ADAM23 is a common risk gene for canine idiopathic epilepsy Koskinen, Lotta L. E. Seppälä, Eija H. Weissl, Jutta Jokinen, Tarja S. Viitmaa, Ranno Hänninen, Reetta L. Quignon, Pascale Fischer, Andrea André, Catherine Lohi, Hannes BMC Genet Research Article BACKGROUND: Idiopathic or genetic adult-onset epilepsy is a common neurological disorder in domestic dogs. Genetic association has been reported only with ADAM23 on CFA 37 in few breeds. To identify novel epilepsy genes, we performed genome-wide association (GWA) analyses in four new breeds, and investigated the association of the previously reported ADAM23 haplotype with the epilepsy phenotype in eight breeds. RESULTS: GWA analysis did not reveal new epilepsy loci. ADAM23 association (p < 0.05) was identified in five breeds. Combined analysis of all eight breeds showed significant association (p = 4.6e(−6), OR 1.9). CONCLUSIONS: Our results further support the role of ADAM23 in multiple breeds as a common risk gene for epilepsy with low penetrance. The lack of findings in the GWA analyses points towards inefficient capture of genetic variation by the current SNP arrays, causal variant(s) with low penetrance and possible phenocopies. Future work will include studies on ADAM23 function and expression in canine neurons, as well as whole-genome sequencing in order to identify additional IE genes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12863-017-0478-6) contains supplementary material, which is available to authorized users. BioMed Central 2017-01-31 /pmc/articles/PMC5282852/ /pubmed/28143391 http://dx.doi.org/10.1186/s12863-017-0478-6 Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Koskinen, Lotta L. E. Seppälä, Eija H. Weissl, Jutta Jokinen, Tarja S. Viitmaa, Ranno Hänninen, Reetta L. Quignon, Pascale Fischer, Andrea André, Catherine Lohi, Hannes ADAM23 is a common risk gene for canine idiopathic epilepsy |
title | ADAM23 is a common risk gene for canine idiopathic epilepsy |
title_full | ADAM23 is a common risk gene for canine idiopathic epilepsy |
title_fullStr | ADAM23 is a common risk gene for canine idiopathic epilepsy |
title_full_unstemmed | ADAM23 is a common risk gene for canine idiopathic epilepsy |
title_short | ADAM23 is a common risk gene for canine idiopathic epilepsy |
title_sort | adam23 is a common risk gene for canine idiopathic epilepsy |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5282852/ https://www.ncbi.nlm.nih.gov/pubmed/28143391 http://dx.doi.org/10.1186/s12863-017-0478-6 |
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