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Fundamental Activity Constraints Lead to Specific Interpretations of the Connectome
The continuous integration of experimental data into coherent models of the brain is an increasing challenge of modern neuroscience. Such models provide a bridge between structure and activity, and identify the mechanisms giving rise to experimental observations. Nevertheless, structurally realistic...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5287462/ https://www.ncbi.nlm.nih.gov/pubmed/28146554 http://dx.doi.org/10.1371/journal.pcbi.1005179 |
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author | Schuecker, Jannis Schmidt, Maximilian van Albada, Sacha J. Diesmann, Markus Helias, Moritz |
author_facet | Schuecker, Jannis Schmidt, Maximilian van Albada, Sacha J. Diesmann, Markus Helias, Moritz |
author_sort | Schuecker, Jannis |
collection | PubMed |
description | The continuous integration of experimental data into coherent models of the brain is an increasing challenge of modern neuroscience. Such models provide a bridge between structure and activity, and identify the mechanisms giving rise to experimental observations. Nevertheless, structurally realistic network models of spiking neurons are necessarily underconstrained even if experimental data on brain connectivity are incorporated to the best of our knowledge. Guided by physiological observations, any model must therefore explore the parameter ranges within the uncertainty of the data. Based on simulation results alone, however, the mechanisms underlying stable and physiologically realistic activity often remain obscure. We here employ a mean-field reduction of the dynamics, which allows us to include activity constraints into the process of model construction. We shape the phase space of a multi-scale network model of the vision-related areas of macaque cortex by systematically refining its connectivity. Fundamental constraints on the activity, i.e., prohibiting quiescence and requiring global stability, prove sufficient to obtain realistic layer- and area-specific activity. Only small adaptations of the structure are required, showing that the network operates close to an instability. The procedure identifies components of the network critical to its collective dynamics and creates hypotheses for structural data and future experiments. The method can be applied to networks involving any neuron model with a known gain function. |
format | Online Article Text |
id | pubmed-5287462 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-52874622017-02-17 Fundamental Activity Constraints Lead to Specific Interpretations of the Connectome Schuecker, Jannis Schmidt, Maximilian van Albada, Sacha J. Diesmann, Markus Helias, Moritz PLoS Comput Biol Research Article The continuous integration of experimental data into coherent models of the brain is an increasing challenge of modern neuroscience. Such models provide a bridge between structure and activity, and identify the mechanisms giving rise to experimental observations. Nevertheless, structurally realistic network models of spiking neurons are necessarily underconstrained even if experimental data on brain connectivity are incorporated to the best of our knowledge. Guided by physiological observations, any model must therefore explore the parameter ranges within the uncertainty of the data. Based on simulation results alone, however, the mechanisms underlying stable and physiologically realistic activity often remain obscure. We here employ a mean-field reduction of the dynamics, which allows us to include activity constraints into the process of model construction. We shape the phase space of a multi-scale network model of the vision-related areas of macaque cortex by systematically refining its connectivity. Fundamental constraints on the activity, i.e., prohibiting quiescence and requiring global stability, prove sufficient to obtain realistic layer- and area-specific activity. Only small adaptations of the structure are required, showing that the network operates close to an instability. The procedure identifies components of the network critical to its collective dynamics and creates hypotheses for structural data and future experiments. The method can be applied to networks involving any neuron model with a known gain function. Public Library of Science 2017-02-01 /pmc/articles/PMC5287462/ /pubmed/28146554 http://dx.doi.org/10.1371/journal.pcbi.1005179 Text en © 2017 Schuecker et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Schuecker, Jannis Schmidt, Maximilian van Albada, Sacha J. Diesmann, Markus Helias, Moritz Fundamental Activity Constraints Lead to Specific Interpretations of the Connectome |
title | Fundamental Activity Constraints Lead to Specific Interpretations of the Connectome |
title_full | Fundamental Activity Constraints Lead to Specific Interpretations of the Connectome |
title_fullStr | Fundamental Activity Constraints Lead to Specific Interpretations of the Connectome |
title_full_unstemmed | Fundamental Activity Constraints Lead to Specific Interpretations of the Connectome |
title_short | Fundamental Activity Constraints Lead to Specific Interpretations of the Connectome |
title_sort | fundamental activity constraints lead to specific interpretations of the connectome |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5287462/ https://www.ncbi.nlm.nih.gov/pubmed/28146554 http://dx.doi.org/10.1371/journal.pcbi.1005179 |
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