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Foliar fungi of Betula pendula: impact of tree species mixtures and assessment methods

Foliar fungi of silver birch (Betula pendula) in an experimental Finnish forest were investigated across a gradient of tree species richness using molecular high-throughput sequencing and visual macroscopic assessment. We hypothesized that the molecular approach detects more fungal taxa than visual...

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Autores principales: Nguyen, Diem, Boberg, Johanna, Cleary, Michelle, Bruelheide, Helge, Hönig, Lydia, Koricheva, Julia, Stenlid, Jan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5288799/
https://www.ncbi.nlm.nih.gov/pubmed/28150710
http://dx.doi.org/10.1038/srep41801
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author Nguyen, Diem
Boberg, Johanna
Cleary, Michelle
Bruelheide, Helge
Hönig, Lydia
Koricheva, Julia
Stenlid, Jan
author_facet Nguyen, Diem
Boberg, Johanna
Cleary, Michelle
Bruelheide, Helge
Hönig, Lydia
Koricheva, Julia
Stenlid, Jan
author_sort Nguyen, Diem
collection PubMed
description Foliar fungi of silver birch (Betula pendula) in an experimental Finnish forest were investigated across a gradient of tree species richness using molecular high-throughput sequencing and visual macroscopic assessment. We hypothesized that the molecular approach detects more fungal taxa than visual assessment, and that there is a relationship among the most common fungal taxa detected by both techniques. Furthermore, we hypothesized that the fungal community composition, diversity, and distribution patterns are affected by changes in tree diversity. Sequencing revealed greater diversity of fungi on birch leaves than the visual assessment method. One species showed a linear relationship between the methods. Species-specific variation in fungal community composition could be partially explained by tree diversity, though overall fungal diversity was not affected by tree diversity. Analysis of specific fungal taxa indicated tree diversity effects at the local neighbourhood scale, where the proportion of birch among neighbouring trees varied, but not at the plot scale. In conclusion, both methods may be used to determine tree diversity effects on the foliar fungal community. However, high-throughput sequencing provided higher resolution of the fungal community, while the visual macroscopic assessment detected functionally active fungal species.
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spelling pubmed-52887992017-02-06 Foliar fungi of Betula pendula: impact of tree species mixtures and assessment methods Nguyen, Diem Boberg, Johanna Cleary, Michelle Bruelheide, Helge Hönig, Lydia Koricheva, Julia Stenlid, Jan Sci Rep Article Foliar fungi of silver birch (Betula pendula) in an experimental Finnish forest were investigated across a gradient of tree species richness using molecular high-throughput sequencing and visual macroscopic assessment. We hypothesized that the molecular approach detects more fungal taxa than visual assessment, and that there is a relationship among the most common fungal taxa detected by both techniques. Furthermore, we hypothesized that the fungal community composition, diversity, and distribution patterns are affected by changes in tree diversity. Sequencing revealed greater diversity of fungi on birch leaves than the visual assessment method. One species showed a linear relationship between the methods. Species-specific variation in fungal community composition could be partially explained by tree diversity, though overall fungal diversity was not affected by tree diversity. Analysis of specific fungal taxa indicated tree diversity effects at the local neighbourhood scale, where the proportion of birch among neighbouring trees varied, but not at the plot scale. In conclusion, both methods may be used to determine tree diversity effects on the foliar fungal community. However, high-throughput sequencing provided higher resolution of the fungal community, while the visual macroscopic assessment detected functionally active fungal species. Nature Publishing Group 2017-02-02 /pmc/articles/PMC5288799/ /pubmed/28150710 http://dx.doi.org/10.1038/srep41801 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Nguyen, Diem
Boberg, Johanna
Cleary, Michelle
Bruelheide, Helge
Hönig, Lydia
Koricheva, Julia
Stenlid, Jan
Foliar fungi of Betula pendula: impact of tree species mixtures and assessment methods
title Foliar fungi of Betula pendula: impact of tree species mixtures and assessment methods
title_full Foliar fungi of Betula pendula: impact of tree species mixtures and assessment methods
title_fullStr Foliar fungi of Betula pendula: impact of tree species mixtures and assessment methods
title_full_unstemmed Foliar fungi of Betula pendula: impact of tree species mixtures and assessment methods
title_short Foliar fungi of Betula pendula: impact of tree species mixtures and assessment methods
title_sort foliar fungi of betula pendula: impact of tree species mixtures and assessment methods
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5288799/
https://www.ncbi.nlm.nih.gov/pubmed/28150710
http://dx.doi.org/10.1038/srep41801
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