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Genetic toolbox for controlled expression of functional proteins in Geobacillus spp.

Species of genus Geobacillus are thermophilic bacteria and play an ever increasing role as hosts for biotechnological applications both in academia and industry. Here we screened a number of Geobacillus strains to determine which industrially relevant carbon sources they can utilize. One of the stra...

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Detalles Bibliográficos
Autores principales: Pogrebnyakov, Ivan, Jendresen, Christian Bille, Nielsen, Alex Toftgaard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5289569/
https://www.ncbi.nlm.nih.gov/pubmed/28152017
http://dx.doi.org/10.1371/journal.pone.0171313
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author Pogrebnyakov, Ivan
Jendresen, Christian Bille
Nielsen, Alex Toftgaard
author_facet Pogrebnyakov, Ivan
Jendresen, Christian Bille
Nielsen, Alex Toftgaard
author_sort Pogrebnyakov, Ivan
collection PubMed
description Species of genus Geobacillus are thermophilic bacteria and play an ever increasing role as hosts for biotechnological applications both in academia and industry. Here we screened a number of Geobacillus strains to determine which industrially relevant carbon sources they can utilize. One of the strains, G. thermoglucosidasius C56-YS93, was then chosen to develop a toolbox for controlled gene expression over a wide range of levels. It includes a library of semi-synthetic constitutive promoters (76-fold difference in expression levels) and an inducible promoter from the xylA gene. A library of synthetic in silico designed ribosome binding sites was also created for further tuning of translation. The P(xylA) was further used to successfully express native and heterologous xylanases in G. thermoglucosidasius. This toolbox enables fine-tuning of gene expression in Geobacillus species for metabolic engineering approaches in production of biochemicals and heterologous proteins.
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spelling pubmed-52895692017-02-17 Genetic toolbox for controlled expression of functional proteins in Geobacillus spp. Pogrebnyakov, Ivan Jendresen, Christian Bille Nielsen, Alex Toftgaard PLoS One Research Article Species of genus Geobacillus are thermophilic bacteria and play an ever increasing role as hosts for biotechnological applications both in academia and industry. Here we screened a number of Geobacillus strains to determine which industrially relevant carbon sources they can utilize. One of the strains, G. thermoglucosidasius C56-YS93, was then chosen to develop a toolbox for controlled gene expression over a wide range of levels. It includes a library of semi-synthetic constitutive promoters (76-fold difference in expression levels) and an inducible promoter from the xylA gene. A library of synthetic in silico designed ribosome binding sites was also created for further tuning of translation. The P(xylA) was further used to successfully express native and heterologous xylanases in G. thermoglucosidasius. This toolbox enables fine-tuning of gene expression in Geobacillus species for metabolic engineering approaches in production of biochemicals and heterologous proteins. Public Library of Science 2017-02-02 /pmc/articles/PMC5289569/ /pubmed/28152017 http://dx.doi.org/10.1371/journal.pone.0171313 Text en © 2017 Pogrebnyakov et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Pogrebnyakov, Ivan
Jendresen, Christian Bille
Nielsen, Alex Toftgaard
Genetic toolbox for controlled expression of functional proteins in Geobacillus spp.
title Genetic toolbox for controlled expression of functional proteins in Geobacillus spp.
title_full Genetic toolbox for controlled expression of functional proteins in Geobacillus spp.
title_fullStr Genetic toolbox for controlled expression of functional proteins in Geobacillus spp.
title_full_unstemmed Genetic toolbox for controlled expression of functional proteins in Geobacillus spp.
title_short Genetic toolbox for controlled expression of functional proteins in Geobacillus spp.
title_sort genetic toolbox for controlled expression of functional proteins in geobacillus spp.
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5289569/
https://www.ncbi.nlm.nih.gov/pubmed/28152017
http://dx.doi.org/10.1371/journal.pone.0171313
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