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Four pyrrole derivatives used as building blocks in the synthesis of minor-groove binders

The title nitro­pyrrole-based compounds, C(7)H(8)N(2)O(4), (I) (ethyl 4-nitro-1H-pyrrole-2-carboxyl­ate), its derivative C(12)H(14)N(2)O(4), (II) [ethyl 4-nitro-1-(4-pent­yn­yl)-1H-pyrrole-2-carboxyl­ate], C(15)H(26)N(4)O(3), (III) {N-[3-(di­methyamino)prop­yl]-1-isopentyl-4-nitro-1H-pyrrole-2-carbo...

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Detalles Bibliográficos
Autores principales: Kennedy, Alan R., Khalaf, Abedawn I., Scott, Fraser J., Suckling, Colin J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5290577/
https://www.ncbi.nlm.nih.gov/pubmed/28217354
http://dx.doi.org/10.1107/S2056989017001177
Descripción
Sumario:The title nitro­pyrrole-based compounds, C(7)H(8)N(2)O(4), (I) (ethyl 4-nitro-1H-pyrrole-2-carboxyl­ate), its derivative C(12)H(14)N(2)O(4), (II) [ethyl 4-nitro-1-(4-pent­yn­yl)-1H-pyrrole-2-carboxyl­ate], C(15)H(26)N(4)O(3), (III) {N-[3-(di­methyamino)prop­yl]-1-isopentyl-4-nitro-1H-pyrrole-2-carboxamide}, and C(20)H(27)N(9)O(5), (IV) {1-(3-azido­prop­yl)-4-(1-methyl-4-nitro-1H-pyrrole-2-carboxamido)-N-[2-(morpholin-4-yl)eth­yl]-1H-pyrrole-2-carboxamide}, are inter­mediates used in the synthesis of modified DNA minor-groove binders. In all four compounds, the nitro groups lie in the plane of the pyrrole ring. In compounds (I) and (II), the ester groups also lie in the plane of the pyrrole ring. In compound (III), both of the other substituents lie out of the plane of the pyrrole ring. In the case of compound (IV), the coplanarity extends to the second pyrrole ring and through both amide groups. In the crystals of all four compounds, layer-like structures are formed, via a combination of N—H⋯O and C—H⋯O hydrogen bonds for (I), (III) and (IV), but by only C—H⋯O hydrogen bonds for (II).