Cargando…

Four pyrrole derivatives used as building blocks in the synthesis of minor-groove binders

The title nitro­pyrrole-based compounds, C(7)H(8)N(2)O(4), (I) (ethyl 4-nitro-1H-pyrrole-2-carboxyl­ate), its derivative C(12)H(14)N(2)O(4), (II) [ethyl 4-nitro-1-(4-pent­yn­yl)-1H-pyrrole-2-carboxyl­ate], C(15)H(26)N(4)O(3), (III) {N-[3-(di­methyamino)prop­yl]-1-isopentyl-4-nitro-1H-pyrrole-2-carbo...

Descripción completa

Detalles Bibliográficos
Autores principales: Kennedy, Alan R., Khalaf, Abedawn I., Scott, Fraser J., Suckling, Colin J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5290577/
https://www.ncbi.nlm.nih.gov/pubmed/28217354
http://dx.doi.org/10.1107/S2056989017001177
_version_ 1782504660553170944
author Kennedy, Alan R.
Khalaf, Abedawn I.
Scott, Fraser J.
Suckling, Colin J.
author_facet Kennedy, Alan R.
Khalaf, Abedawn I.
Scott, Fraser J.
Suckling, Colin J.
author_sort Kennedy, Alan R.
collection PubMed
description The title nitro­pyrrole-based compounds, C(7)H(8)N(2)O(4), (I) (ethyl 4-nitro-1H-pyrrole-2-carboxyl­ate), its derivative C(12)H(14)N(2)O(4), (II) [ethyl 4-nitro-1-(4-pent­yn­yl)-1H-pyrrole-2-carboxyl­ate], C(15)H(26)N(4)O(3), (III) {N-[3-(di­methyamino)prop­yl]-1-isopentyl-4-nitro-1H-pyrrole-2-carboxamide}, and C(20)H(27)N(9)O(5), (IV) {1-(3-azido­prop­yl)-4-(1-methyl-4-nitro-1H-pyrrole-2-carboxamido)-N-[2-(morpholin-4-yl)eth­yl]-1H-pyrrole-2-carboxamide}, are inter­mediates used in the synthesis of modified DNA minor-groove binders. In all four compounds, the nitro groups lie in the plane of the pyrrole ring. In compounds (I) and (II), the ester groups also lie in the plane of the pyrrole ring. In compound (III), both of the other substituents lie out of the plane of the pyrrole ring. In the case of compound (IV), the coplanarity extends to the second pyrrole ring and through both amide groups. In the crystals of all four compounds, layer-like structures are formed, via a combination of N—H⋯O and C—H⋯O hydrogen bonds for (I), (III) and (IV), but by only C—H⋯O hydrogen bonds for (II).
format Online
Article
Text
id pubmed-5290577
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher International Union of Crystallography
record_format MEDLINE/PubMed
spelling pubmed-52905772017-02-17 Four pyrrole derivatives used as building blocks in the synthesis of minor-groove binders Kennedy, Alan R. Khalaf, Abedawn I. Scott, Fraser J. Suckling, Colin J. Acta Crystallogr E Crystallogr Commun Research Communications The title nitro­pyrrole-based compounds, C(7)H(8)N(2)O(4), (I) (ethyl 4-nitro-1H-pyrrole-2-carboxyl­ate), its derivative C(12)H(14)N(2)O(4), (II) [ethyl 4-nitro-1-(4-pent­yn­yl)-1H-pyrrole-2-carboxyl­ate], C(15)H(26)N(4)O(3), (III) {N-[3-(di­methyamino)prop­yl]-1-isopentyl-4-nitro-1H-pyrrole-2-carboxamide}, and C(20)H(27)N(9)O(5), (IV) {1-(3-azido­prop­yl)-4-(1-methyl-4-nitro-1H-pyrrole-2-carboxamido)-N-[2-(morpholin-4-yl)eth­yl]-1H-pyrrole-2-carboxamide}, are inter­mediates used in the synthesis of modified DNA minor-groove binders. In all four compounds, the nitro groups lie in the plane of the pyrrole ring. In compounds (I) and (II), the ester groups also lie in the plane of the pyrrole ring. In compound (III), both of the other substituents lie out of the plane of the pyrrole ring. In the case of compound (IV), the coplanarity extends to the second pyrrole ring and through both amide groups. In the crystals of all four compounds, layer-like structures are formed, via a combination of N—H⋯O and C—H⋯O hydrogen bonds for (I), (III) and (IV), but by only C—H⋯O hydrogen bonds for (II). International Union of Crystallography 2017-01-27 /pmc/articles/PMC5290577/ /pubmed/28217354 http://dx.doi.org/10.1107/S2056989017001177 Text en © Kennedy et al. 2017 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/2.0/uk/
spellingShingle Research Communications
Kennedy, Alan R.
Khalaf, Abedawn I.
Scott, Fraser J.
Suckling, Colin J.
Four pyrrole derivatives used as building blocks in the synthesis of minor-groove binders
title Four pyrrole derivatives used as building blocks in the synthesis of minor-groove binders
title_full Four pyrrole derivatives used as building blocks in the synthesis of minor-groove binders
title_fullStr Four pyrrole derivatives used as building blocks in the synthesis of minor-groove binders
title_full_unstemmed Four pyrrole derivatives used as building blocks in the synthesis of minor-groove binders
title_short Four pyrrole derivatives used as building blocks in the synthesis of minor-groove binders
title_sort four pyrrole derivatives used as building blocks in the synthesis of minor-groove binders
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5290577/
https://www.ncbi.nlm.nih.gov/pubmed/28217354
http://dx.doi.org/10.1107/S2056989017001177
work_keys_str_mv AT kennedyalanr fourpyrrolederivativesusedasbuildingblocksinthesynthesisofminorgroovebinders
AT khalafabedawni fourpyrrolederivativesusedasbuildingblocksinthesynthesisofminorgroovebinders
AT scottfraserj fourpyrrolederivativesusedasbuildingblocksinthesynthesisofminorgroovebinders
AT sucklingcolinj fourpyrrolederivativesusedasbuildingblocksinthesynthesisofminorgroovebinders