Cargando…

Diversity analysis of cotton (Gossypium hirsutum L.) germplasm using the CottonSNP63K Array

BACKGROUND: Cotton germplasm resources contain beneficial alleles that can be exploited to develop germplasm adapted to emerging environmental and climate conditions. Accessions and lines have traditionally been characterized based on phenotypes, but phenotypic profiles are limited by the cost, time...

Descripción completa

Detalles Bibliográficos
Autores principales:	Hinze, Lori L., Hulse-Kemp, Amanda M., Wilson, Iain W., Zhu, Qian-Hao, Llewellyn, Danny J., Taylor, Jen M., Spriggs, Andrew, Fang, David D., Ulloa, Mauricio, Burke, John J., Giband, Marc, Lacape, Jean-Marc, Van Deynze, Allen, Udall, Joshua A., Scheffler, Jodi A., Hague, Steve, Wendel, Jonathan F., Pepper, Alan E., Frelichowski, James, Lawley, Cindy T., Jones, Don C., Percy, Richard G., Stelly, David M.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2017
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5291959/ https://www.ncbi.nlm.nih.gov/pubmed/28158969 http://dx.doi.org/10.1186/s12870-017-0981-y

Ejemplares similares

Discovery and Analyses of Caulimovirid-like Sequences in Upland Cotton (Gossypium hirsutum)
por: Aboughanem-Sabanadzovic, Nina, et al.
Publicado: (2023)

Development and bin mapping of gene-associated interspecific SNPs for cotton (Gossypium hirsutum L.) introgression breeding efforts
por: Hulse-Kemp, Amanda M, et al.
Publicado: (2014)

Development of a 63K SNP Array for Cotton and High-Density Mapping of Intraspecific and Interspecific Populations of Gossypium spp.
por: Hulse-Kemp, Amanda M., et al.
Publicado: (2015)

Genome sequence of Gossypium herbaceum and genome updates of Gossypium arboreum and Gossypium hirsutum provide insights into cotton A-genome evolution
por: Huang, Gai, et al.
Publicado: (2020)

Distribution and Differentiation of Wild, Feral, and Cultivated Populations of Perennial Upland Cotton (Gossypium hirsutum L.) in Mesoamerica and the Caribbean
por: Coppens d'Eeckenbrugge, Geo, et al.
Publicado: (2014)

High-density linkage map construction and QTL analyses for fiber quality, yield and morphological traits using CottonSNP63K array in upland cotton (Gossypium hirsutum L.)
por: Zhang, Kuang, et al.
Publicado: (2019)

Gene expression in developing fibres of Upland cotton (Gossypium hirsutum L.) was massively altered by domestication
por: Rapp, Ryan A, et al.
Publicado: (2010)

Molecular insight into cotton leaf curl geminivirus disease resistance in cultivated cotton (Gossypium hirsutum)
por: Zaidi, Syed Shan‐e‐Ali, et al.
Publicado: (2019)

Comparative Evolutionary and Developmental Dynamics of the Cotton (Gossypium hirsutum) Fiber Transcriptome
por: Yoo, Mi-Jeong, et al.
Publicado: (2014)

Genetic Analysis of the Transition from Wild to Domesticated Cotton (Gossypium hirsutum L.)
por: Grover, Corrinne E., et al.
Publicado: (2019)

Meta-analysis of cotton fiber quality QTLs across diverse environments in a Gossypium hirsutum x G. barbadense RIL population
por: Lacape, Jean-Marc, et al.
Publicado: (2010)

Chemical defense responses of upland cotton, Gossypium hirsutum L. to physical wounding
por: Park, Sang‐Hyuck, et al.
Publicado: (2019)

Identification of the family of aquaporin genes and their expression in upland cotton (Gossypium hirsutum L.)
por: Park, Wonkeun, et al.
Publicado: (2010)

The Gossypium longicalyx Genome as a Resource for Cotton Breeding and Evolution
por: Grover, Corrinne E., et al.
Publicado: (2020)

Sub genome anchored physical frameworks of the allotetraploid Upland cotton (Gossypium hirsutum L.) genome, and an approach toward reference-grade assemblies of polyploids
por: Saski, Christopher A., et al.
Publicado: (2017)

RNA-Seq Transcriptome Profiling of Upland Cotton (Gossypium hirsutum L.) Root Tissue under Water-Deficit Stress
por: Bowman, Megan J., et al.
Publicado: (2013)

CMD: a Cotton Microsatellite Database resource for Gossypium genomics
por: Blenda, Anna, et al.
Publicado: (2006)

Insights into the Evolution of Cotton Diploids and Polyploids from Whole-Genome Re-sequencing
por: Page, Justin T., et al.
Publicado: (2013)

Insights into the Evolution of the New World Diploid Cottons (Gossypium, Subgenus Houzingenia) Based on Genome Sequencing
por: Grover, Corrinne E, et al.
Publicado: (2018)

Flavonoid Profile of the Cotton Plant, Gossypium hirsutum: A Review
por: Nix, Aaron, et al.
Publicado: (2017)

Co-expression of nitrogenase proteins in cotton (Gossypium hirsutum L.)
por: Shang, Yimin, et al.
Publicado: (2023)

Detecting Cotton Leaf Curl Virus Resistance Quantitative Trait Loci in Gossypium hirsutum and iCottonQTL a New R/Shiny App to Streamline Genetic Mapping
por: Schoonmaker, Ashley N., et al.
Publicado: (2023)

Homology-based identification of candidate genes for male sterility editing in upland cotton (Gossypium hirsutum L.)
por: Morales, Karina Y., et al.
Publicado: (2022)

Genetic Map Construction and Fiber Quality QTL Mapping Using the CottonSNP80K Array in Upland Cotton
por: Tan, Zhaoyun, et al.
Publicado: (2018)

Leveraging National Germplasm Collections to Determine Significantly Associated Categorical Traits in Crops: Upland and Pima Cotton as a Case Study
por: Restrepo-Montoya, Daniel, et al.
Publicado: (2022)

Genome Physical Mapping of Polyploids: A BIBAC Physical Map of Cultivated Tetraploid Cotton, Gossypium hirsutum L
por: Zhang, Meiping, et al.
Publicado: (2012)

BAC-End Sequence-Based SNP Mining in Allotetraploid Cotton (Gossypium) Utilizing Resequencing Data, Phylogenetic Inferences, and Perspectives for Genetic Mapping
por: Hulse-Kemp, Amanda M., et al.
Publicado: (2015)

DNA Sequence Evolution and Rare Homoeologous Conversion in Tetraploid Cotton
por: Page, Justin T., et al.
Publicado: (2016)

Cytogenetic Characteristics of New Monosomic Stocks of Cotton (Gossypium hirsutum L.)
por: Sanamyan, Marina F., et al.
Publicado: (2011)

Genome-Wide Functional Analysis of Cotton (Gossypium hirsutum) in Response to Drought
por: Chen, Yun, et al.
Publicado: (2013)

Morphological and Physiological Responses of Cotton (Gossypium hirsutum L.) Plants to Salinity
por: Zhang, Lei, et al.
Publicado: (2014)

Exogenous melatonin accelerates seed germination in cotton (Gossypium hirsutum L.)
por: Xiao, Shuang, et al.
Publicado: (2019)

Rotation of Cotton (Gossypium hirsutum) Cultivars and Fallow on Yield and Rotylenchulus reniformis
por: Soto-Ramos, Casiani, et al.
Publicado: (2023)

Molecular Evolution and Expansion of the KUP Family in the Allopolyploid Cotton Species Gossypium hirsutum and Gossypium barbadense
por: Fan, Kai, et al.
Publicado: (2020)

Progressive drought alters the root exudate metabolome and differentially activates metabolic pathways in cotton (Gossypium hirsutum)
por: Lin, Heng-An, et al.
Publicado: (2023)

Correction: DNA Sequence Evolution and Rare Homoeologous Conversion in Tetraploid Cotton
por: Page, Justin T., et al.
Publicado: (2016)

QTL analysis for early-maturing traits in cotton using two upland cotton (Gossypium hirsutum L.) crosses
por: Li, Chengqi, et al.
Publicado: (2013)

Genome-Wide Introgression and Quantitative Trait Locus Mapping Reveals the Potential of Asian Cotton (Gossypium arboreum) in Improving Upland Cotton (Gossypium hirsutum)
por: Feng, Liuchun, et al.
Publicado: (2021)

The Li(2) Mutation Results in Reduced Subgenome Expression Bias in Elongating Fibers of Allotetraploid Cotton (Gossypium hirsutum L.)
por: Naoumkina, Marina, et al.
Publicado: (2014)

Insights Into Upland Cotton (Gossypium hirsutum L.) Genetic Recombination Based on 3 High-Density Single-Nucleotide Polymorphism and a Consensus Map Developed Independently With Common Parents
por: Ulloa, Mauricio, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_gqtt520c36srdk6i73rlpghc92