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Gastric Cancer Associated Genes Identified by an Integrative Analysis of Gene Expression Data
Gastric cancer is one of the most severe complex diseases with high morbidity and mortality in the world. The molecular mechanisms and risk factors for this disease are still not clear since the cancer heterogeneity caused by different genetic and environmental factors. With more and more expression...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5292384/ https://www.ncbi.nlm.nih.gov/pubmed/28232943 http://dx.doi.org/10.1155/2017/7259097 |
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author | Jiang, Bing Li, Shuwen Jiang, Zhi Shao, Ping |
author_facet | Jiang, Bing Li, Shuwen Jiang, Zhi Shao, Ping |
author_sort | Jiang, Bing |
collection | PubMed |
description | Gastric cancer is one of the most severe complex diseases with high morbidity and mortality in the world. The molecular mechanisms and risk factors for this disease are still not clear since the cancer heterogeneity caused by different genetic and environmental factors. With more and more expression data accumulated nowadays, we can perform integrative analysis for these data to understand the complexity of gastric cancer and to identify consensus players for the heterogeneous cancer. In the present work, we screened the published gene expression data and analyzed them with integrative tool, combined with pathway and gene ontology enrichment investigation. We identified several consensus differentially expressed genes and these genes were further confirmed with literature mining; at last, two genes, that is, immunoglobulin J chain and C-X-C motif chemokine ligand 17, were screened as novel gastric cancer associated genes. Experimental validation is proposed to further confirm this finding. |
format | Online Article Text |
id | pubmed-5292384 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-52923842017-02-23 Gastric Cancer Associated Genes Identified by an Integrative Analysis of Gene Expression Data Jiang, Bing Li, Shuwen Jiang, Zhi Shao, Ping Biomed Res Int Research Article Gastric cancer is one of the most severe complex diseases with high morbidity and mortality in the world. The molecular mechanisms and risk factors for this disease are still not clear since the cancer heterogeneity caused by different genetic and environmental factors. With more and more expression data accumulated nowadays, we can perform integrative analysis for these data to understand the complexity of gastric cancer and to identify consensus players for the heterogeneous cancer. In the present work, we screened the published gene expression data and analyzed them with integrative tool, combined with pathway and gene ontology enrichment investigation. We identified several consensus differentially expressed genes and these genes were further confirmed with literature mining; at last, two genes, that is, immunoglobulin J chain and C-X-C motif chemokine ligand 17, were screened as novel gastric cancer associated genes. Experimental validation is proposed to further confirm this finding. Hindawi Publishing Corporation 2017 2017-01-23 /pmc/articles/PMC5292384/ /pubmed/28232943 http://dx.doi.org/10.1155/2017/7259097 Text en Copyright © 2017 Bing Jiang et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Jiang, Bing Li, Shuwen Jiang, Zhi Shao, Ping Gastric Cancer Associated Genes Identified by an Integrative Analysis of Gene Expression Data |
title | Gastric Cancer Associated Genes Identified by an Integrative Analysis of Gene Expression Data |
title_full | Gastric Cancer Associated Genes Identified by an Integrative Analysis of Gene Expression Data |
title_fullStr | Gastric Cancer Associated Genes Identified by an Integrative Analysis of Gene Expression Data |
title_full_unstemmed | Gastric Cancer Associated Genes Identified by an Integrative Analysis of Gene Expression Data |
title_short | Gastric Cancer Associated Genes Identified by an Integrative Analysis of Gene Expression Data |
title_sort | gastric cancer associated genes identified by an integrative analysis of gene expression data |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5292384/ https://www.ncbi.nlm.nih.gov/pubmed/28232943 http://dx.doi.org/10.1155/2017/7259097 |
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