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Evaluation of the GeneXpert for Human Monkeypox Diagnosis

Monkeypox virus (MPXV), a zoonotic orthopoxvirus (OPX), is endemic in the Democratic Republic of Congo (DRC). Currently, diagnostic assays for human monkeypox (MPX) focus on real-time quantitative polymerase chain reaction (PCR) assays, which are typically performed in sophisticated laboratory setti...

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Autores principales: Li, Daniel, Wilkins, Kimberly, McCollum, Andrea M., Osadebe, Lynda, Kabamba, Joelle, Nguete, Beatrice, Likafi, Toutou, Balilo, Marcel Pie, Lushima, Robert Shongo, Malekani, Jean, Damon, Inger K., Vickery, Michael C. L., Pukuta, Elisabeth, Nkawa, Frida, Karhemere, Stomy, Tamfum, Jean-Jacques Muyembe, Okitolonda, Emile Wemakoy, Li, Yu, Reynolds, Mary G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The American Society of Tropical Medicine and Hygiene 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5303045/
https://www.ncbi.nlm.nih.gov/pubmed/27994107
http://dx.doi.org/10.4269/ajtmh.16-0567
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author Li, Daniel
Wilkins, Kimberly
McCollum, Andrea M.
Osadebe, Lynda
Kabamba, Joelle
Nguete, Beatrice
Likafi, Toutou
Balilo, Marcel Pie
Lushima, Robert Shongo
Malekani, Jean
Damon, Inger K.
Vickery, Michael C. L.
Pukuta, Elisabeth
Nkawa, Frida
Karhemere, Stomy
Tamfum, Jean-Jacques Muyembe
Okitolonda, Emile Wemakoy
Li, Yu
Reynolds, Mary G.
author_facet Li, Daniel
Wilkins, Kimberly
McCollum, Andrea M.
Osadebe, Lynda
Kabamba, Joelle
Nguete, Beatrice
Likafi, Toutou
Balilo, Marcel Pie
Lushima, Robert Shongo
Malekani, Jean
Damon, Inger K.
Vickery, Michael C. L.
Pukuta, Elisabeth
Nkawa, Frida
Karhemere, Stomy
Tamfum, Jean-Jacques Muyembe
Okitolonda, Emile Wemakoy
Li, Yu
Reynolds, Mary G.
author_sort Li, Daniel
collection PubMed
description Monkeypox virus (MPXV), a zoonotic orthopoxvirus (OPX), is endemic in the Democratic Republic of Congo (DRC). Currently, diagnostic assays for human monkeypox (MPX) focus on real-time quantitative polymerase chain reaction (PCR) assays, which are typically performed in sophisticated laboratory settings. Herein, we evaluated the accuracy and utility of a multiplex MPX assay using the GeneXpert platform, a portable rapid diagnostic device that may serve as a point-of-care test to diagnose infections in endemic areas. The multiplex MPX/OPX assay includes a MPX-specific PCR test, OPX-generic PCR test, and an internal control PCR test. In total, 164 diagnostic specimens (50 crusts and 114 vesicular swabs) were collected from suspected MPX cases in Tshuapa Province, DRC, under national surveillance guidelines. The specimens were tested with the GeneXpert MPX/OPX assay and an OPX PCR assay at the Institut National de Recherche Biomedicale (INRB) in Kinshasa. Aliquots of each specimen were tested in parallel with a MPX-specific PCR assay at the Centers for Disease Control and Prevention. The results of the MPX PCR were used as the gold standard for all analyses. The GeneXpert MPX/OPX assay performed at INRB had a sensitivity of 98.8% and specificity of 100%. The GeneXpert assay performed well with both crust and vesicle samples. The GeneXpert MPX/OPX test incorporates a simple methodology that performs well in both laboratory and field conditions, suggesting its viability as a diagnostic platform that may expand and expedite current MPX detection capabilities.
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spelling pubmed-53030452017-02-16 Evaluation of the GeneXpert for Human Monkeypox Diagnosis Li, Daniel Wilkins, Kimberly McCollum, Andrea M. Osadebe, Lynda Kabamba, Joelle Nguete, Beatrice Likafi, Toutou Balilo, Marcel Pie Lushima, Robert Shongo Malekani, Jean Damon, Inger K. Vickery, Michael C. L. Pukuta, Elisabeth Nkawa, Frida Karhemere, Stomy Tamfum, Jean-Jacques Muyembe Okitolonda, Emile Wemakoy Li, Yu Reynolds, Mary G. Am J Trop Med Hyg Articles Monkeypox virus (MPXV), a zoonotic orthopoxvirus (OPX), is endemic in the Democratic Republic of Congo (DRC). Currently, diagnostic assays for human monkeypox (MPX) focus on real-time quantitative polymerase chain reaction (PCR) assays, which are typically performed in sophisticated laboratory settings. Herein, we evaluated the accuracy and utility of a multiplex MPX assay using the GeneXpert platform, a portable rapid diagnostic device that may serve as a point-of-care test to diagnose infections in endemic areas. The multiplex MPX/OPX assay includes a MPX-specific PCR test, OPX-generic PCR test, and an internal control PCR test. In total, 164 diagnostic specimens (50 crusts and 114 vesicular swabs) were collected from suspected MPX cases in Tshuapa Province, DRC, under national surveillance guidelines. The specimens were tested with the GeneXpert MPX/OPX assay and an OPX PCR assay at the Institut National de Recherche Biomedicale (INRB) in Kinshasa. Aliquots of each specimen were tested in parallel with a MPX-specific PCR assay at the Centers for Disease Control and Prevention. The results of the MPX PCR were used as the gold standard for all analyses. The GeneXpert MPX/OPX assay performed at INRB had a sensitivity of 98.8% and specificity of 100%. The GeneXpert assay performed well with both crust and vesicle samples. The GeneXpert MPX/OPX test incorporates a simple methodology that performs well in both laboratory and field conditions, suggesting its viability as a diagnostic platform that may expand and expedite current MPX detection capabilities. The American Society of Tropical Medicine and Hygiene 2017-02-08 /pmc/articles/PMC5303045/ /pubmed/27994107 http://dx.doi.org/10.4269/ajtmh.16-0567 Text en © The American Society of Tropical Medicine and Hygiene This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Articles
Li, Daniel
Wilkins, Kimberly
McCollum, Andrea M.
Osadebe, Lynda
Kabamba, Joelle
Nguete, Beatrice
Likafi, Toutou
Balilo, Marcel Pie
Lushima, Robert Shongo
Malekani, Jean
Damon, Inger K.
Vickery, Michael C. L.
Pukuta, Elisabeth
Nkawa, Frida
Karhemere, Stomy
Tamfum, Jean-Jacques Muyembe
Okitolonda, Emile Wemakoy
Li, Yu
Reynolds, Mary G.
Evaluation of the GeneXpert for Human Monkeypox Diagnosis
title Evaluation of the GeneXpert for Human Monkeypox Diagnosis
title_full Evaluation of the GeneXpert for Human Monkeypox Diagnosis
title_fullStr Evaluation of the GeneXpert for Human Monkeypox Diagnosis
title_full_unstemmed Evaluation of the GeneXpert for Human Monkeypox Diagnosis
title_short Evaluation of the GeneXpert for Human Monkeypox Diagnosis
title_sort evaluation of the genexpert for human monkeypox diagnosis
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5303045/
https://www.ncbi.nlm.nih.gov/pubmed/27994107
http://dx.doi.org/10.4269/ajtmh.16-0567
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