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Topological and functional analysis of nonalcoholic steatohepatitis through protein interaction mapping
AIM: The corresponding proteins are important for network mapping since the interaction analysis can provide a new interpretation about disease underlying mechanisms as the aim of this study. BACKGROUD: Nonalcoholic steatohepatitis (NASH) is one of the main causes of liver disease in the world. It h...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Shaheed Beheshti University of Medical Sciences
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5310796/ https://www.ncbi.nlm.nih.gov/pubmed/28224024 |
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author | Asadzadeh-Aghdaee, Hamid Mansouri, Vahid Peyvandi, Ali Asghar Moztarzadeh, Fathollah Okhovatian, Farshad Lahmi, Farhad Vafaee, Reza Zali, Mohammad Reza |
author_facet | Asadzadeh-Aghdaee, Hamid Mansouri, Vahid Peyvandi, Ali Asghar Moztarzadeh, Fathollah Okhovatian, Farshad Lahmi, Farhad Vafaee, Reza Zali, Mohammad Reza |
author_sort | Asadzadeh-Aghdaee, Hamid |
collection | PubMed |
description | AIM: The corresponding proteins are important for network mapping since the interaction analysis can provide a new interpretation about disease underlying mechanisms as the aim of this study. BACKGROUD: Nonalcoholic steatohepatitis (NASH) is one of the main causes of liver disease in the world. It has been known with many susceptible proteins that play essential role in its pathogenesis. METHODS: In this paper, protein-protein interaction (PPI) network analysis of fatty liver disease retrieved from STRING db by the application of Cytoscape Software. ClueGO analyzed the associated pathways for the selected top proteins. RESULTS: INS, PPARA, LEP, SREBF1, and ALB are the introduced biomarker panel for fatty liver disease. CONCLUSION: It seems that pathways related to insulin have a prominent role in fatty liver disease. Therefore, investigation in this case is required to confirm the possible linkage of introduced panel and involvement of insulin pathway in the disease. |
format | Online Article Text |
id | pubmed-5310796 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Shaheed Beheshti University of Medical Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-53107962017-02-21 Topological and functional analysis of nonalcoholic steatohepatitis through protein interaction mapping Asadzadeh-Aghdaee, Hamid Mansouri, Vahid Peyvandi, Ali Asghar Moztarzadeh, Fathollah Okhovatian, Farshad Lahmi, Farhad Vafaee, Reza Zali, Mohammad Reza Gastroenterol Hepatol Bed Bench Original Article AIM: The corresponding proteins are important for network mapping since the interaction analysis can provide a new interpretation about disease underlying mechanisms as the aim of this study. BACKGROUD: Nonalcoholic steatohepatitis (NASH) is one of the main causes of liver disease in the world. It has been known with many susceptible proteins that play essential role in its pathogenesis. METHODS: In this paper, protein-protein interaction (PPI) network analysis of fatty liver disease retrieved from STRING db by the application of Cytoscape Software. ClueGO analyzed the associated pathways for the selected top proteins. RESULTS: INS, PPARA, LEP, SREBF1, and ALB are the introduced biomarker panel for fatty liver disease. CONCLUSION: It seems that pathways related to insulin have a prominent role in fatty liver disease. Therefore, investigation in this case is required to confirm the possible linkage of introduced panel and involvement of insulin pathway in the disease. Shaheed Beheshti University of Medical Sciences 2016-12 /pmc/articles/PMC5310796/ /pubmed/28224024 Text en ©2016 RIGLD, Research Institute for Gastroenterology and Liver Diseases This is an Open Access article distributed under the terms of the Creative Commons Attribution License, (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Asadzadeh-Aghdaee, Hamid Mansouri, Vahid Peyvandi, Ali Asghar Moztarzadeh, Fathollah Okhovatian, Farshad Lahmi, Farhad Vafaee, Reza Zali, Mohammad Reza Topological and functional analysis of nonalcoholic steatohepatitis through protein interaction mapping |
title | Topological and functional analysis of nonalcoholic steatohepatitis through protein interaction mapping |
title_full | Topological and functional analysis of nonalcoholic steatohepatitis through protein interaction mapping |
title_fullStr | Topological and functional analysis of nonalcoholic steatohepatitis through protein interaction mapping |
title_full_unstemmed | Topological and functional analysis of nonalcoholic steatohepatitis through protein interaction mapping |
title_short | Topological and functional analysis of nonalcoholic steatohepatitis through protein interaction mapping |
title_sort | topological and functional analysis of nonalcoholic steatohepatitis through protein interaction mapping |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5310796/ https://www.ncbi.nlm.nih.gov/pubmed/28224024 |
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