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Meta-QTL for resistance to white mold in common bean

White mold, caused by the fungus Sclerotinia sclerotiorum (Lib.) de Bary, is a major disease that limits common bean production and quality worldwide. The host-pathogen interaction is complex, with partial resistance in the host inherited as a quantitative trait with low to moderate heritability. Ou...

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Autores principales: Vasconcellos, Renato C. C., Oraguzie, O. Blessing, Soler, Alvaro, Arkwazee, Haidar, Myers, James R., Ferreira, Juan J., Song, Qijian, McClean, Phil, Miklas, Phillip N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5310892/
https://www.ncbi.nlm.nih.gov/pubmed/28199342
http://dx.doi.org/10.1371/journal.pone.0171685
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author Vasconcellos, Renato C. C.
Oraguzie, O. Blessing
Soler, Alvaro
Arkwazee, Haidar
Myers, James R.
Ferreira, Juan J.
Song, Qijian
McClean, Phil
Miklas, Phillip N.
author_facet Vasconcellos, Renato C. C.
Oraguzie, O. Blessing
Soler, Alvaro
Arkwazee, Haidar
Myers, James R.
Ferreira, Juan J.
Song, Qijian
McClean, Phil
Miklas, Phillip N.
author_sort Vasconcellos, Renato C. C.
collection PubMed
description White mold, caused by the fungus Sclerotinia sclerotiorum (Lib.) de Bary, is a major disease that limits common bean production and quality worldwide. The host-pathogen interaction is complex, with partial resistance in the host inherited as a quantitative trait with low to moderate heritability. Our objective was to identify meta-QTL conditioning partial resistance to white mold from individual QTL identified across multiple populations and environments. The physical positions for 37 individual QTL were identified across 14 recombinant inbred bi-parental populations (six new, three re-genotyped, and five from the literature). A meta-QTL analysis of the 37 QTL was conducted using the genetic linkage map of Stampede x Red Hawk population as the reference. The 37 QTL condensed into 17 named loci (12 previously named and five new) of which nine were defined as meta-QTL WM1.1, WM2.2, WM3.1, WM5.4, WM6.2, WM7.1, WM7.4, WM7.5, and WM8.3. The nine meta-QTL had confidence intervals ranging from 0.65 to 9.41 Mb. Candidate genes shown to express under S. sclerotiorum infection in other studies, including cell wall receptor kinase, COI1, ethylene responsive transcription factor, peroxidase, and MYB transcription factor, were found within the confidence interval for five of the meta-QTL. The nine meta-QTL are recommended as potential targets for MAS for partial resistance to white mold in common bean.
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spelling pubmed-53108922017-03-03 Meta-QTL for resistance to white mold in common bean Vasconcellos, Renato C. C. Oraguzie, O. Blessing Soler, Alvaro Arkwazee, Haidar Myers, James R. Ferreira, Juan J. Song, Qijian McClean, Phil Miklas, Phillip N. PLoS One Research Article White mold, caused by the fungus Sclerotinia sclerotiorum (Lib.) de Bary, is a major disease that limits common bean production and quality worldwide. The host-pathogen interaction is complex, with partial resistance in the host inherited as a quantitative trait with low to moderate heritability. Our objective was to identify meta-QTL conditioning partial resistance to white mold from individual QTL identified across multiple populations and environments. The physical positions for 37 individual QTL were identified across 14 recombinant inbred bi-parental populations (six new, three re-genotyped, and five from the literature). A meta-QTL analysis of the 37 QTL was conducted using the genetic linkage map of Stampede x Red Hawk population as the reference. The 37 QTL condensed into 17 named loci (12 previously named and five new) of which nine were defined as meta-QTL WM1.1, WM2.2, WM3.1, WM5.4, WM6.2, WM7.1, WM7.4, WM7.5, and WM8.3. The nine meta-QTL had confidence intervals ranging from 0.65 to 9.41 Mb. Candidate genes shown to express under S. sclerotiorum infection in other studies, including cell wall receptor kinase, COI1, ethylene responsive transcription factor, peroxidase, and MYB transcription factor, were found within the confidence interval for five of the meta-QTL. The nine meta-QTL are recommended as potential targets for MAS for partial resistance to white mold in common bean. Public Library of Science 2017-02-15 /pmc/articles/PMC5310892/ /pubmed/28199342 http://dx.doi.org/10.1371/journal.pone.0171685 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Research Article
Vasconcellos, Renato C. C.
Oraguzie, O. Blessing
Soler, Alvaro
Arkwazee, Haidar
Myers, James R.
Ferreira, Juan J.
Song, Qijian
McClean, Phil
Miklas, Phillip N.
Meta-QTL for resistance to white mold in common bean
title Meta-QTL for resistance to white mold in common bean
title_full Meta-QTL for resistance to white mold in common bean
title_fullStr Meta-QTL for resistance to white mold in common bean
title_full_unstemmed Meta-QTL for resistance to white mold in common bean
title_short Meta-QTL for resistance to white mold in common bean
title_sort meta-qtl for resistance to white mold in common bean
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5310892/
https://www.ncbi.nlm.nih.gov/pubmed/28199342
http://dx.doi.org/10.1371/journal.pone.0171685
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