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Meta-QTL for resistance to white mold in common bean
White mold, caused by the fungus Sclerotinia sclerotiorum (Lib.) de Bary, is a major disease that limits common bean production and quality worldwide. The host-pathogen interaction is complex, with partial resistance in the host inherited as a quantitative trait with low to moderate heritability. Ou...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5310892/ https://www.ncbi.nlm.nih.gov/pubmed/28199342 http://dx.doi.org/10.1371/journal.pone.0171685 |
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author | Vasconcellos, Renato C. C. Oraguzie, O. Blessing Soler, Alvaro Arkwazee, Haidar Myers, James R. Ferreira, Juan J. Song, Qijian McClean, Phil Miklas, Phillip N. |
author_facet | Vasconcellos, Renato C. C. Oraguzie, O. Blessing Soler, Alvaro Arkwazee, Haidar Myers, James R. Ferreira, Juan J. Song, Qijian McClean, Phil Miklas, Phillip N. |
author_sort | Vasconcellos, Renato C. C. |
collection | PubMed |
description | White mold, caused by the fungus Sclerotinia sclerotiorum (Lib.) de Bary, is a major disease that limits common bean production and quality worldwide. The host-pathogen interaction is complex, with partial resistance in the host inherited as a quantitative trait with low to moderate heritability. Our objective was to identify meta-QTL conditioning partial resistance to white mold from individual QTL identified across multiple populations and environments. The physical positions for 37 individual QTL were identified across 14 recombinant inbred bi-parental populations (six new, three re-genotyped, and five from the literature). A meta-QTL analysis of the 37 QTL was conducted using the genetic linkage map of Stampede x Red Hawk population as the reference. The 37 QTL condensed into 17 named loci (12 previously named and five new) of which nine were defined as meta-QTL WM1.1, WM2.2, WM3.1, WM5.4, WM6.2, WM7.1, WM7.4, WM7.5, and WM8.3. The nine meta-QTL had confidence intervals ranging from 0.65 to 9.41 Mb. Candidate genes shown to express under S. sclerotiorum infection in other studies, including cell wall receptor kinase, COI1, ethylene responsive transcription factor, peroxidase, and MYB transcription factor, were found within the confidence interval for five of the meta-QTL. The nine meta-QTL are recommended as potential targets for MAS for partial resistance to white mold in common bean. |
format | Online Article Text |
id | pubmed-5310892 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-53108922017-03-03 Meta-QTL for resistance to white mold in common bean Vasconcellos, Renato C. C. Oraguzie, O. Blessing Soler, Alvaro Arkwazee, Haidar Myers, James R. Ferreira, Juan J. Song, Qijian McClean, Phil Miklas, Phillip N. PLoS One Research Article White mold, caused by the fungus Sclerotinia sclerotiorum (Lib.) de Bary, is a major disease that limits common bean production and quality worldwide. The host-pathogen interaction is complex, with partial resistance in the host inherited as a quantitative trait with low to moderate heritability. Our objective was to identify meta-QTL conditioning partial resistance to white mold from individual QTL identified across multiple populations and environments. The physical positions for 37 individual QTL were identified across 14 recombinant inbred bi-parental populations (six new, three re-genotyped, and five from the literature). A meta-QTL analysis of the 37 QTL was conducted using the genetic linkage map of Stampede x Red Hawk population as the reference. The 37 QTL condensed into 17 named loci (12 previously named and five new) of which nine were defined as meta-QTL WM1.1, WM2.2, WM3.1, WM5.4, WM6.2, WM7.1, WM7.4, WM7.5, and WM8.3. The nine meta-QTL had confidence intervals ranging from 0.65 to 9.41 Mb. Candidate genes shown to express under S. sclerotiorum infection in other studies, including cell wall receptor kinase, COI1, ethylene responsive transcription factor, peroxidase, and MYB transcription factor, were found within the confidence interval for five of the meta-QTL. The nine meta-QTL are recommended as potential targets for MAS for partial resistance to white mold in common bean. Public Library of Science 2017-02-15 /pmc/articles/PMC5310892/ /pubmed/28199342 http://dx.doi.org/10.1371/journal.pone.0171685 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication. |
spellingShingle | Research Article Vasconcellos, Renato C. C. Oraguzie, O. Blessing Soler, Alvaro Arkwazee, Haidar Myers, James R. Ferreira, Juan J. Song, Qijian McClean, Phil Miklas, Phillip N. Meta-QTL for resistance to white mold in common bean |
title | Meta-QTL for resistance to white mold in common bean |
title_full | Meta-QTL for resistance to white mold in common bean |
title_fullStr | Meta-QTL for resistance to white mold in common bean |
title_full_unstemmed | Meta-QTL for resistance to white mold in common bean |
title_short | Meta-QTL for resistance to white mold in common bean |
title_sort | meta-qtl for resistance to white mold in common bean |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5310892/ https://www.ncbi.nlm.nih.gov/pubmed/28199342 http://dx.doi.org/10.1371/journal.pone.0171685 |
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