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Drosophila and genome-wide association studies: a review and resource for the functional dissection of human complex traits

Human genome-wide association studies (GWAS) have successfully identified thousands of susceptibility loci for common diseases with complex genetic etiologies. Although the susceptibility variants identified by GWAS usually have only modest effects on individual disease risk, they contribute to a su...

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Autores principales: Wangler, Michael F., Hu, Yanhui, Shulman, Joshua M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Company of Biologists Ltd 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5312009/
https://www.ncbi.nlm.nih.gov/pubmed/28151408
http://dx.doi.org/10.1242/dmm.027680
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author Wangler, Michael F.
Hu, Yanhui
Shulman, Joshua M.
author_facet Wangler, Michael F.
Hu, Yanhui
Shulman, Joshua M.
author_sort Wangler, Michael F.
collection PubMed
description Human genome-wide association studies (GWAS) have successfully identified thousands of susceptibility loci for common diseases with complex genetic etiologies. Although the susceptibility variants identified by GWAS usually have only modest effects on individual disease risk, they contribute to a substantial burden of trait variation in the overall population. GWAS also offer valuable clues to disease mechanisms that have long proven to be elusive. These insights could lead the way to breakthrough treatments; however, several challenges hinder progress, making innovative approaches to accelerate the follow-up of results from GWAS an urgent priority. Here, we discuss the largely untapped potential of the fruit fly, Drosophila melanogaster, for functional investigation of findings from human GWAS. We highlight selected examples where strong genomic conservation with humans along with the rapid and powerful genetic tools available for flies have already facilitated fine mapping of association signals, elucidated gene mechanisms, and revealed novel disease-relevant biology. We emphasize current research opportunities in this rapidly advancing field, and present bioinformatic analyses that systematically explore the applicability of Drosophila for interrogation of susceptibility signals implicated in more than 1000 human traits, based on all GWAS completed to date. Thus, our discussion is targeted at both human geneticists seeking innovative strategies for experimental validation of findings from GWAS, as well as the Drosophila research community, by whom ongoing investigations of the implicated genes will powerfully inform our understanding of human disease.
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spelling pubmed-53120092017-03-06 Drosophila and genome-wide association studies: a review and resource for the functional dissection of human complex traits Wangler, Michael F. Hu, Yanhui Shulman, Joshua M. Dis Model Mech Special Article Human genome-wide association studies (GWAS) have successfully identified thousands of susceptibility loci for common diseases with complex genetic etiologies. Although the susceptibility variants identified by GWAS usually have only modest effects on individual disease risk, they contribute to a substantial burden of trait variation in the overall population. GWAS also offer valuable clues to disease mechanisms that have long proven to be elusive. These insights could lead the way to breakthrough treatments; however, several challenges hinder progress, making innovative approaches to accelerate the follow-up of results from GWAS an urgent priority. Here, we discuss the largely untapped potential of the fruit fly, Drosophila melanogaster, for functional investigation of findings from human GWAS. We highlight selected examples where strong genomic conservation with humans along with the rapid and powerful genetic tools available for flies have already facilitated fine mapping of association signals, elucidated gene mechanisms, and revealed novel disease-relevant biology. We emphasize current research opportunities in this rapidly advancing field, and present bioinformatic analyses that systematically explore the applicability of Drosophila for interrogation of susceptibility signals implicated in more than 1000 human traits, based on all GWAS completed to date. Thus, our discussion is targeted at both human geneticists seeking innovative strategies for experimental validation of findings from GWAS, as well as the Drosophila research community, by whom ongoing investigations of the implicated genes will powerfully inform our understanding of human disease. The Company of Biologists Ltd 2017-02-01 /pmc/articles/PMC5312009/ /pubmed/28151408 http://dx.doi.org/10.1242/dmm.027680 Text en © 2017. Published by The Company of Biologists Ltd http://creativecommons.org/licenses/by/3.0This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0), which permits unrestricted use, distribution and reproduction in any medium provided that the original work is properly attributed.
spellingShingle Special Article
Wangler, Michael F.
Hu, Yanhui
Shulman, Joshua M.
Drosophila and genome-wide association studies: a review and resource for the functional dissection of human complex traits
title Drosophila and genome-wide association studies: a review and resource for the functional dissection of human complex traits
title_full Drosophila and genome-wide association studies: a review and resource for the functional dissection of human complex traits
title_fullStr Drosophila and genome-wide association studies: a review and resource for the functional dissection of human complex traits
title_full_unstemmed Drosophila and genome-wide association studies: a review and resource for the functional dissection of human complex traits
title_short Drosophila and genome-wide association studies: a review and resource for the functional dissection of human complex traits
title_sort drosophila and genome-wide association studies: a review and resource for the functional dissection of human complex traits
topic Special Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5312009/
https://www.ncbi.nlm.nih.gov/pubmed/28151408
http://dx.doi.org/10.1242/dmm.027680
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