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Establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of SFTS virus
BACKGROUND: Severe fever with thrombocytopenia syndrome (SFTS) caused by SFTS virus (SFTSV) usually have a high fatality. At present no effective therapy or vaccine are available, so early diagnosis of SFTS is crucial to prevent and control SFTSV infection. This study aimed to establish a national r...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5312432/ https://www.ncbi.nlm.nih.gov/pubmed/28202038 http://dx.doi.org/10.1186/s12985-017-0682-z |
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author | Lu, Xu Wang, Ling Bai, Dongting Li, Yuhua |
author_facet | Lu, Xu Wang, Ling Bai, Dongting Li, Yuhua |
author_sort | Lu, Xu |
collection | PubMed |
description | BACKGROUND: Severe fever with thrombocytopenia syndrome (SFTS) caused by SFTS virus (SFTSV) usually have a high fatality. At present no effective therapy or vaccine are available, so early diagnosis of SFTS is crucial to prevent and control SFTSV infection. This study aimed to establish a national reference for these diagnostic kits of SFTSV genome and make the diagnosis of the disease effective. METHODS: Six SFTSV strains isolated from different regions, and five relative viruses with similar clinical manifestations were selected as positive and negative references and assessed using real time quantitative PCR (q-PCR) using specific primers and probe and two commercial kits. The stability of the references was also assessed at 37 °C, room temperature or -70 °C for 8 days, 14 days or 8 months respectively, or following several cycles of freezing-thawing. Collaborative calibration of the references was performed by three labs. RESULTS: The references indicated good accuracy and specificity. The lowest detection limit was 10(2) U/mL. The accuracy was coefficient of variation less than 5%. The references were highly stable at high temperatures and after long storing and freezing-thawing treatment. CONCLUSIONS: We successfully established a national reference with good accuracy, high specificity, sensitivity and stability, which can be applied for quality control of commercial SFTSV diagnostic kits, thus preventing and controlling SFTS. TRIAL REGISTRATION: The references have been finished and it was retrospectively registered in the following article. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12985-017-0682-z) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5312432 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-53124322017-02-24 Establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of SFTS virus Lu, Xu Wang, Ling Bai, Dongting Li, Yuhua Virol J Research BACKGROUND: Severe fever with thrombocytopenia syndrome (SFTS) caused by SFTS virus (SFTSV) usually have a high fatality. At present no effective therapy or vaccine are available, so early diagnosis of SFTS is crucial to prevent and control SFTSV infection. This study aimed to establish a national reference for these diagnostic kits of SFTSV genome and make the diagnosis of the disease effective. METHODS: Six SFTSV strains isolated from different regions, and five relative viruses with similar clinical manifestations were selected as positive and negative references and assessed using real time quantitative PCR (q-PCR) using specific primers and probe and two commercial kits. The stability of the references was also assessed at 37 °C, room temperature or -70 °C for 8 days, 14 days or 8 months respectively, or following several cycles of freezing-thawing. Collaborative calibration of the references was performed by three labs. RESULTS: The references indicated good accuracy and specificity. The lowest detection limit was 10(2) U/mL. The accuracy was coefficient of variation less than 5%. The references were highly stable at high temperatures and after long storing and freezing-thawing treatment. CONCLUSIONS: We successfully established a national reference with good accuracy, high specificity, sensitivity and stability, which can be applied for quality control of commercial SFTSV diagnostic kits, thus preventing and controlling SFTS. TRIAL REGISTRATION: The references have been finished and it was retrospectively registered in the following article. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12985-017-0682-z) contains supplementary material, which is available to authorized users. BioMed Central 2017-02-16 /pmc/articles/PMC5312432/ /pubmed/28202038 http://dx.doi.org/10.1186/s12985-017-0682-z Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Lu, Xu Wang, Ling Bai, Dongting Li, Yuhua Establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of SFTS virus |
title | Establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of SFTS virus |
title_full | Establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of SFTS virus |
title_fullStr | Establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of SFTS virus |
title_full_unstemmed | Establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of SFTS virus |
title_short | Establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of SFTS virus |
title_sort | establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of sfts virus |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5312432/ https://www.ncbi.nlm.nih.gov/pubmed/28202038 http://dx.doi.org/10.1186/s12985-017-0682-z |
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