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Establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of SFTS virus

BACKGROUND: Severe fever with thrombocytopenia syndrome (SFTS) caused by SFTS virus (SFTSV) usually have a high fatality. At present no effective therapy or vaccine are available, so early diagnosis of SFTS is crucial to prevent and control SFTSV infection. This study aimed to establish a national r...

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Autores principales: Lu, Xu, Wang, Ling, Bai, Dongting, Li, Yuhua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5312432/
https://www.ncbi.nlm.nih.gov/pubmed/28202038
http://dx.doi.org/10.1186/s12985-017-0682-z
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author Lu, Xu
Wang, Ling
Bai, Dongting
Li, Yuhua
author_facet Lu, Xu
Wang, Ling
Bai, Dongting
Li, Yuhua
author_sort Lu, Xu
collection PubMed
description BACKGROUND: Severe fever with thrombocytopenia syndrome (SFTS) caused by SFTS virus (SFTSV) usually have a high fatality. At present no effective therapy or vaccine are available, so early diagnosis of SFTS is crucial to prevent and control SFTSV infection. This study aimed to establish a national reference for these diagnostic kits of SFTSV genome and make the diagnosis of the disease effective. METHODS: Six SFTSV strains isolated from different regions, and five relative viruses with similar clinical manifestations were selected as positive and negative references and assessed using real time quantitative PCR (q-PCR) using specific primers and probe and two commercial kits. The stability of the references was also assessed at 37 °C, room temperature or -70 °C for 8 days, 14 days or 8 months respectively, or following several cycles of freezing-thawing. Collaborative calibration of the references was performed by three labs. RESULTS: The references indicated good accuracy and specificity. The lowest detection limit was 10(2) U/mL. The accuracy was coefficient of variation less than 5%. The references were highly stable at high temperatures and after long storing and freezing-thawing treatment. CONCLUSIONS: We successfully established a national reference with good accuracy, high specificity, sensitivity and stability, which can be applied for quality control of commercial SFTSV diagnostic kits, thus preventing and controlling SFTS. TRIAL REGISTRATION: The references have been finished and it was retrospectively registered in the following article. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12985-017-0682-z) contains supplementary material, which is available to authorized users.
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spelling pubmed-53124322017-02-24 Establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of SFTS virus Lu, Xu Wang, Ling Bai, Dongting Li, Yuhua Virol J Research BACKGROUND: Severe fever with thrombocytopenia syndrome (SFTS) caused by SFTS virus (SFTSV) usually have a high fatality. At present no effective therapy or vaccine are available, so early diagnosis of SFTS is crucial to prevent and control SFTSV infection. This study aimed to establish a national reference for these diagnostic kits of SFTSV genome and make the diagnosis of the disease effective. METHODS: Six SFTSV strains isolated from different regions, and five relative viruses with similar clinical manifestations were selected as positive and negative references and assessed using real time quantitative PCR (q-PCR) using specific primers and probe and two commercial kits. The stability of the references was also assessed at 37 °C, room temperature or -70 °C for 8 days, 14 days or 8 months respectively, or following several cycles of freezing-thawing. Collaborative calibration of the references was performed by three labs. RESULTS: The references indicated good accuracy and specificity. The lowest detection limit was 10(2) U/mL. The accuracy was coefficient of variation less than 5%. The references were highly stable at high temperatures and after long storing and freezing-thawing treatment. CONCLUSIONS: We successfully established a national reference with good accuracy, high specificity, sensitivity and stability, which can be applied for quality control of commercial SFTSV diagnostic kits, thus preventing and controlling SFTS. TRIAL REGISTRATION: The references have been finished and it was retrospectively registered in the following article. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12985-017-0682-z) contains supplementary material, which is available to authorized users. BioMed Central 2017-02-16 /pmc/articles/PMC5312432/ /pubmed/28202038 http://dx.doi.org/10.1186/s12985-017-0682-z Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Lu, Xu
Wang, Ling
Bai, Dongting
Li, Yuhua
Establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of SFTS virus
title Establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of SFTS virus
title_full Establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of SFTS virus
title_fullStr Establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of SFTS virus
title_full_unstemmed Establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of SFTS virus
title_short Establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of SFTS virus
title_sort establishment of national reference for bunyavirus nucleic acid detection kits for diagnosis of sfts virus
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5312432/
https://www.ncbi.nlm.nih.gov/pubmed/28202038
http://dx.doi.org/10.1186/s12985-017-0682-z
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