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Quantitative evaluation of simulated functional brain networks in graph theoretical analysis
There is increasing interest in the potential of whole-brain computational models to provide mechanistic insights into resting-state brain networks. It is therefore important to determine the degree to which computational models reproduce the topological features of empirical functional brain networ...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Academic Press
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5312789/ https://www.ncbi.nlm.nih.gov/pubmed/27568060 http://dx.doi.org/10.1016/j.neuroimage.2016.08.050 |
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author | Lee, Won Hee Bullmore, Ed Frangou, Sophia |
author_facet | Lee, Won Hee Bullmore, Ed Frangou, Sophia |
author_sort | Lee, Won Hee |
collection | PubMed |
description | There is increasing interest in the potential of whole-brain computational models to provide mechanistic insights into resting-state brain networks. It is therefore important to determine the degree to which computational models reproduce the topological features of empirical functional brain networks. We used empirical connectivity data derived from diffusion spectrum and resting-state functional magnetic resonance imaging data from healthy individuals. Empirical and simulated functional networks, constrained by structural connectivity, were defined based on 66 brain anatomical regions (nodes). Simulated functional data were generated using the Kuramoto model in which each anatomical region acts as a phase oscillator. Network topology was studied using graph theory in the empirical and simulated data. The difference (relative error) between graph theory measures derived from empirical and simulated data was then estimated. We found that simulated data can be used with confidence to model graph measures of global network organization at different dynamic states and highlight the sensitive dependence of the solutions obtained in simulated data on the specified connection densities. This study provides a method for the quantitative evaluation and external validation of graph theory metrics derived from simulated data that can be used to inform future study designs. |
format | Online Article Text |
id | pubmed-5312789 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Academic Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-53127892017-02-22 Quantitative evaluation of simulated functional brain networks in graph theoretical analysis Lee, Won Hee Bullmore, Ed Frangou, Sophia Neuroimage Article There is increasing interest in the potential of whole-brain computational models to provide mechanistic insights into resting-state brain networks. It is therefore important to determine the degree to which computational models reproduce the topological features of empirical functional brain networks. We used empirical connectivity data derived from diffusion spectrum and resting-state functional magnetic resonance imaging data from healthy individuals. Empirical and simulated functional networks, constrained by structural connectivity, were defined based on 66 brain anatomical regions (nodes). Simulated functional data were generated using the Kuramoto model in which each anatomical region acts as a phase oscillator. Network topology was studied using graph theory in the empirical and simulated data. The difference (relative error) between graph theory measures derived from empirical and simulated data was then estimated. We found that simulated data can be used with confidence to model graph measures of global network organization at different dynamic states and highlight the sensitive dependence of the solutions obtained in simulated data on the specified connection densities. This study provides a method for the quantitative evaluation and external validation of graph theory metrics derived from simulated data that can be used to inform future study designs. Academic Press 2017-02-01 /pmc/articles/PMC5312789/ /pubmed/27568060 http://dx.doi.org/10.1016/j.neuroimage.2016.08.050 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Lee, Won Hee Bullmore, Ed Frangou, Sophia Quantitative evaluation of simulated functional brain networks in graph theoretical analysis |
title | Quantitative evaluation of simulated functional brain networks in graph theoretical analysis |
title_full | Quantitative evaluation of simulated functional brain networks in graph theoretical analysis |
title_fullStr | Quantitative evaluation of simulated functional brain networks in graph theoretical analysis |
title_full_unstemmed | Quantitative evaluation of simulated functional brain networks in graph theoretical analysis |
title_short | Quantitative evaluation of simulated functional brain networks in graph theoretical analysis |
title_sort | quantitative evaluation of simulated functional brain networks in graph theoretical analysis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5312789/ https://www.ncbi.nlm.nih.gov/pubmed/27568060 http://dx.doi.org/10.1016/j.neuroimage.2016.08.050 |
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