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Quantitative evaluation of simulated functional brain networks in graph theoretical analysis

There is increasing interest in the potential of whole-brain computational models to provide mechanistic insights into resting-state brain networks. It is therefore important to determine the degree to which computational models reproduce the topological features of empirical functional brain networ...

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Detalles Bibliográficos
Autores principales: Lee, Won Hee, Bullmore, Ed, Frangou, Sophia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Academic Press 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5312789/
https://www.ncbi.nlm.nih.gov/pubmed/27568060
http://dx.doi.org/10.1016/j.neuroimage.2016.08.050
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author Lee, Won Hee
Bullmore, Ed
Frangou, Sophia
author_facet Lee, Won Hee
Bullmore, Ed
Frangou, Sophia
author_sort Lee, Won Hee
collection PubMed
description There is increasing interest in the potential of whole-brain computational models to provide mechanistic insights into resting-state brain networks. It is therefore important to determine the degree to which computational models reproduce the topological features of empirical functional brain networks. We used empirical connectivity data derived from diffusion spectrum and resting-state functional magnetic resonance imaging data from healthy individuals. Empirical and simulated functional networks, constrained by structural connectivity, were defined based on 66 brain anatomical regions (nodes). Simulated functional data were generated using the Kuramoto model in which each anatomical region acts as a phase oscillator. Network topology was studied using graph theory in the empirical and simulated data. The difference (relative error) between graph theory measures derived from empirical and simulated data was then estimated. We found that simulated data can be used with confidence to model graph measures of global network organization at different dynamic states and highlight the sensitive dependence of the solutions obtained in simulated data on the specified connection densities. This study provides a method for the quantitative evaluation and external validation of graph theory metrics derived from simulated data that can be used to inform future study designs.
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spelling pubmed-53127892017-02-22 Quantitative evaluation of simulated functional brain networks in graph theoretical analysis Lee, Won Hee Bullmore, Ed Frangou, Sophia Neuroimage Article There is increasing interest in the potential of whole-brain computational models to provide mechanistic insights into resting-state brain networks. It is therefore important to determine the degree to which computational models reproduce the topological features of empirical functional brain networks. We used empirical connectivity data derived from diffusion spectrum and resting-state functional magnetic resonance imaging data from healthy individuals. Empirical and simulated functional networks, constrained by structural connectivity, were defined based on 66 brain anatomical regions (nodes). Simulated functional data were generated using the Kuramoto model in which each anatomical region acts as a phase oscillator. Network topology was studied using graph theory in the empirical and simulated data. The difference (relative error) between graph theory measures derived from empirical and simulated data was then estimated. We found that simulated data can be used with confidence to model graph measures of global network organization at different dynamic states and highlight the sensitive dependence of the solutions obtained in simulated data on the specified connection densities. This study provides a method for the quantitative evaluation and external validation of graph theory metrics derived from simulated data that can be used to inform future study designs. Academic Press 2017-02-01 /pmc/articles/PMC5312789/ /pubmed/27568060 http://dx.doi.org/10.1016/j.neuroimage.2016.08.050 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Lee, Won Hee
Bullmore, Ed
Frangou, Sophia
Quantitative evaluation of simulated functional brain networks in graph theoretical analysis
title Quantitative evaluation of simulated functional brain networks in graph theoretical analysis
title_full Quantitative evaluation of simulated functional brain networks in graph theoretical analysis
title_fullStr Quantitative evaluation of simulated functional brain networks in graph theoretical analysis
title_full_unstemmed Quantitative evaluation of simulated functional brain networks in graph theoretical analysis
title_short Quantitative evaluation of simulated functional brain networks in graph theoretical analysis
title_sort quantitative evaluation of simulated functional brain networks in graph theoretical analysis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5312789/
https://www.ncbi.nlm.nih.gov/pubmed/27568060
http://dx.doi.org/10.1016/j.neuroimage.2016.08.050
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