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Diversity of Secondary Structure in Catalytic Peptides with β-Turn-Biased Sequences

[Image: see text] X-ray crystallography has been applied to the structural analysis of a series of tetrapeptides that were previously assessed for catalytic activity in an atroposelective bromination reaction. Common to the series is a central Pro-Xaa sequence, where Pro is either l- or d-proline, w...

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Autores principales: Metrano, Anthony J., Abascal, Nadia C., Mercado, Brandon Q., Paulson, Eric K., Hurtley, Anna E., Miller, Scott J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2016
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5312972/
https://www.ncbi.nlm.nih.gov/pubmed/28029251
http://dx.doi.org/10.1021/jacs.6b11348
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author Metrano, Anthony J.
Abascal, Nadia C.
Mercado, Brandon Q.
Paulson, Eric K.
Hurtley, Anna E.
Miller, Scott J.
author_facet Metrano, Anthony J.
Abascal, Nadia C.
Mercado, Brandon Q.
Paulson, Eric K.
Hurtley, Anna E.
Miller, Scott J.
author_sort Metrano, Anthony J.
collection PubMed
description [Image: see text] X-ray crystallography has been applied to the structural analysis of a series of tetrapeptides that were previously assessed for catalytic activity in an atroposelective bromination reaction. Common to the series is a central Pro-Xaa sequence, where Pro is either l- or d-proline, which was chosen to favor nucleation of canonical β-turn secondary structures. Crystallographic analysis of 35 different peptide sequences revealed a range of conformational states. The observed differences appear not only in cases where the Pro-Xaa loop-region is altered, but also when seemingly subtle alterations to the flanking residues are introduced. In many instances, distinct conformers of the same sequence were observed, either as symmetry-independent molecules within the same unit cell or as polymorphs. Computational studies using DFT provided additional insight into the analysis of solid-state structural features. Select X-ray crystal structures were compared to the corresponding solution structures derived from measured proton chemical shifts, (3)J-values, and (1)H–(1)H-NOESY contacts. These findings imply that the conformational space available to simple peptide-based catalysts is more diverse than precedent might suggest. The direct observation of multiple ground state conformations for peptides of this family, as well as the dynamic processes associated with conformational equilibria, underscore not only the challenge of designing peptide-based catalysts, but also the difficulty in predicting their accessible transition states. These findings implicate the advantages of low-barrier interconversions between conformations of peptide-based catalysts for multistep, enantioselective reactions.
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spelling pubmed-53129722017-02-17 Diversity of Secondary Structure in Catalytic Peptides with β-Turn-Biased Sequences Metrano, Anthony J. Abascal, Nadia C. Mercado, Brandon Q. Paulson, Eric K. Hurtley, Anna E. Miller, Scott J. J Am Chem Soc [Image: see text] X-ray crystallography has been applied to the structural analysis of a series of tetrapeptides that were previously assessed for catalytic activity in an atroposelective bromination reaction. Common to the series is a central Pro-Xaa sequence, where Pro is either l- or d-proline, which was chosen to favor nucleation of canonical β-turn secondary structures. Crystallographic analysis of 35 different peptide sequences revealed a range of conformational states. The observed differences appear not only in cases where the Pro-Xaa loop-region is altered, but also when seemingly subtle alterations to the flanking residues are introduced. In many instances, distinct conformers of the same sequence were observed, either as symmetry-independent molecules within the same unit cell or as polymorphs. Computational studies using DFT provided additional insight into the analysis of solid-state structural features. Select X-ray crystal structures were compared to the corresponding solution structures derived from measured proton chemical shifts, (3)J-values, and (1)H–(1)H-NOESY contacts. These findings imply that the conformational space available to simple peptide-based catalysts is more diverse than precedent might suggest. The direct observation of multiple ground state conformations for peptides of this family, as well as the dynamic processes associated with conformational equilibria, underscore not only the challenge of designing peptide-based catalysts, but also the difficulty in predicting their accessible transition states. These findings implicate the advantages of low-barrier interconversions between conformations of peptide-based catalysts for multistep, enantioselective reactions. American Chemical Society 2016-12-28 2017-01-11 /pmc/articles/PMC5312972/ /pubmed/28029251 http://dx.doi.org/10.1021/jacs.6b11348 Text en Copyright © 2016 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes.
spellingShingle Metrano, Anthony J.
Abascal, Nadia C.
Mercado, Brandon Q.
Paulson, Eric K.
Hurtley, Anna E.
Miller, Scott J.
Diversity of Secondary Structure in Catalytic Peptides with β-Turn-Biased Sequences
title Diversity of Secondary Structure in Catalytic Peptides with β-Turn-Biased Sequences
title_full Diversity of Secondary Structure in Catalytic Peptides with β-Turn-Biased Sequences
title_fullStr Diversity of Secondary Structure in Catalytic Peptides with β-Turn-Biased Sequences
title_full_unstemmed Diversity of Secondary Structure in Catalytic Peptides with β-Turn-Biased Sequences
title_short Diversity of Secondary Structure in Catalytic Peptides with β-Turn-Biased Sequences
title_sort diversity of secondary structure in catalytic peptides with β-turn-biased sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5312972/
https://www.ncbi.nlm.nih.gov/pubmed/28029251
http://dx.doi.org/10.1021/jacs.6b11348
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