Cargando…

Plasma-derived parasitic microRNAs have insufficient concentrations to be used as diagnostic biomarker for detection of Onchocerca volvulus infection or treatment monitoring using LNA-based RT-qPCR

River blindness, caused by infection with the filarial nematode Onchocerca volvulus, is a neglected tropical disease affecting millions of people. There is a clear need for diagnostic tools capable of identifying infected patients, but that can also be used for monitoring disease progression and tre...

Descripción completa

Detalles Bibliográficos
Autores principales: Lagatie, Ole, Batsa Debrah, Linda, Debrah, Alex, Stuyver, Lieven J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5313568/
https://www.ncbi.nlm.nih.gov/pubmed/28111713
http://dx.doi.org/10.1007/s00436-017-5382-5
_version_ 1782508362892574720
author Lagatie, Ole
Batsa Debrah, Linda
Debrah, Alex
Stuyver, Lieven J.
author_facet Lagatie, Ole
Batsa Debrah, Linda
Debrah, Alex
Stuyver, Lieven J.
author_sort Lagatie, Ole
collection PubMed
description River blindness, caused by infection with the filarial nematode Onchocerca volvulus, is a neglected tropical disease affecting millions of people. There is a clear need for diagnostic tools capable of identifying infected patients, but that can also be used for monitoring disease progression and treatment efficacy. Plasma-derived parasitic microRNAs have been suggested as potential candidates for such diagnostic tools. We have investigated whether these parasitic microRNAs are present in sufficient quantity in plasma of Onchocerca-infected patients to be used as a diagnostic biomarker for detection of O. volvulus infection or treatment monitoring. Plasma samples were collected from different sources (23 nodule-positive individuals and 20 microfilaridermic individuals), microRNAs (miRNAs) were extracted using Qiagen miRNeasy kit, and a set of 17 parasitic miRNAs was evaluated on these miRNA extracts using miRCURY Locked Nucleic Acid (LNA) Universal RT microRNA PCR system. Of the 17 miRNAs evaluated, only 7 miRNAs were found to show detectable signal in a number of samples: bma-miR-236-1, bma-miR-71, ov-miR71-22nt, ov-miR-71-23nt, ov-miR-100d, ov-bantam-a, and ov-miR-87-3p. Subsequent melting curve analysis, however, indicated that the signals observed for ov-miR-71 variants and ov-miR-87-3p are non-specific. The other miRNAs only showed positive signal in one or few samples with Cq values just below the cutoff. Our data indicate that parasitic miRNAs are not present in circulation at a sufficiently high level to be used as biomarker for O. volvulus infection or treatment monitoring using LNA-based RT-qPCR analysis.
format Online
Article
Text
id pubmed-5313568
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Springer Berlin Heidelberg
record_format MEDLINE/PubMed
spelling pubmed-53135682017-03-01 Plasma-derived parasitic microRNAs have insufficient concentrations to be used as diagnostic biomarker for detection of Onchocerca volvulus infection or treatment monitoring using LNA-based RT-qPCR Lagatie, Ole Batsa Debrah, Linda Debrah, Alex Stuyver, Lieven J. Parasitol Res Original Paper River blindness, caused by infection with the filarial nematode Onchocerca volvulus, is a neglected tropical disease affecting millions of people. There is a clear need for diagnostic tools capable of identifying infected patients, but that can also be used for monitoring disease progression and treatment efficacy. Plasma-derived parasitic microRNAs have been suggested as potential candidates for such diagnostic tools. We have investigated whether these parasitic microRNAs are present in sufficient quantity in plasma of Onchocerca-infected patients to be used as a diagnostic biomarker for detection of O. volvulus infection or treatment monitoring. Plasma samples were collected from different sources (23 nodule-positive individuals and 20 microfilaridermic individuals), microRNAs (miRNAs) were extracted using Qiagen miRNeasy kit, and a set of 17 parasitic miRNAs was evaluated on these miRNA extracts using miRCURY Locked Nucleic Acid (LNA) Universal RT microRNA PCR system. Of the 17 miRNAs evaluated, only 7 miRNAs were found to show detectable signal in a number of samples: bma-miR-236-1, bma-miR-71, ov-miR71-22nt, ov-miR-71-23nt, ov-miR-100d, ov-bantam-a, and ov-miR-87-3p. Subsequent melting curve analysis, however, indicated that the signals observed for ov-miR-71 variants and ov-miR-87-3p are non-specific. The other miRNAs only showed positive signal in one or few samples with Cq values just below the cutoff. Our data indicate that parasitic miRNAs are not present in circulation at a sufficiently high level to be used as biomarker for O. volvulus infection or treatment monitoring using LNA-based RT-qPCR analysis. Springer Berlin Heidelberg 2017-01-22 2017 /pmc/articles/PMC5313568/ /pubmed/28111713 http://dx.doi.org/10.1007/s00436-017-5382-5 Text en © The Author(s) 2017 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Original Paper
Lagatie, Ole
Batsa Debrah, Linda
Debrah, Alex
Stuyver, Lieven J.
Plasma-derived parasitic microRNAs have insufficient concentrations to be used as diagnostic biomarker for detection of Onchocerca volvulus infection or treatment monitoring using LNA-based RT-qPCR
title Plasma-derived parasitic microRNAs have insufficient concentrations to be used as diagnostic biomarker for detection of Onchocerca volvulus infection or treatment monitoring using LNA-based RT-qPCR
title_full Plasma-derived parasitic microRNAs have insufficient concentrations to be used as diagnostic biomarker for detection of Onchocerca volvulus infection or treatment monitoring using LNA-based RT-qPCR
title_fullStr Plasma-derived parasitic microRNAs have insufficient concentrations to be used as diagnostic biomarker for detection of Onchocerca volvulus infection or treatment monitoring using LNA-based RT-qPCR
title_full_unstemmed Plasma-derived parasitic microRNAs have insufficient concentrations to be used as diagnostic biomarker for detection of Onchocerca volvulus infection or treatment monitoring using LNA-based RT-qPCR
title_short Plasma-derived parasitic microRNAs have insufficient concentrations to be used as diagnostic biomarker for detection of Onchocerca volvulus infection or treatment monitoring using LNA-based RT-qPCR
title_sort plasma-derived parasitic micrornas have insufficient concentrations to be used as diagnostic biomarker for detection of onchocerca volvulus infection or treatment monitoring using lna-based rt-qpcr
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5313568/
https://www.ncbi.nlm.nih.gov/pubmed/28111713
http://dx.doi.org/10.1007/s00436-017-5382-5
work_keys_str_mv AT lagatieole plasmaderivedparasiticmicrornashaveinsufficientconcentrationstobeusedasdiagnosticbiomarkerfordetectionofonchocercavolvulusinfectionortreatmentmonitoringusinglnabasedrtqpcr
AT batsadebrahlinda plasmaderivedparasiticmicrornashaveinsufficientconcentrationstobeusedasdiagnosticbiomarkerfordetectionofonchocercavolvulusinfectionortreatmentmonitoringusinglnabasedrtqpcr
AT debrahalex plasmaderivedparasiticmicrornashaveinsufficientconcentrationstobeusedasdiagnosticbiomarkerfordetectionofonchocercavolvulusinfectionortreatmentmonitoringusinglnabasedrtqpcr
AT stuyverlievenj plasmaderivedparasiticmicrornashaveinsufficientconcentrationstobeusedasdiagnosticbiomarkerfordetectionofonchocercavolvulusinfectionortreatmentmonitoringusinglnabasedrtqpcr