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Toward a consensus in protein structure nomenclature
In a recent article, published in Intrinsically Disordered Proteins, a valuable consensus view regarding the nomenclature for disordered proteins was presented.(1) In this work the authors present a thoughtful and systemic review of terms that have been used in the literature to describe proteins th...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5314908/ https://www.ncbi.nlm.nih.gov/pubmed/28232882 http://dx.doi.org/10.4161/idp.29700 |
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author | DaSilva, Linder C Gurry, Thomas Stultz, Collin M |
author_facet | DaSilva, Linder C Gurry, Thomas Stultz, Collin M |
author_sort | DaSilva, Linder C |
collection | PubMed |
description | In a recent article, published in Intrinsically Disordered Proteins, a valuable consensus view regarding the nomenclature for disordered proteins was presented.(1) In this work the authors present a thoughtful and systemic review of terms that have been used in the literature to describe proteins that sample a heterogeneous set of structures during their biological lifetime. We agree that the term “intrinsically disordered proteins” (IDPs) is an appropriate single descriptor to refer to this particular class of proteins, although it does not fully capture much of the nuanced complexities that are inherent to this class. In what follows we suggest a refinement to this nomenclature based on an analysis of the underlying ensemble that describes the thermally accessible states of a given IDP. |
format | Online Article Text |
id | pubmed-5314908 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-53149082017-02-23 Toward a consensus in protein structure nomenclature DaSilva, Linder C Gurry, Thomas Stultz, Collin M Intrinsically Disord Proteins Commentary In a recent article, published in Intrinsically Disordered Proteins, a valuable consensus view regarding the nomenclature for disordered proteins was presented.(1) In this work the authors present a thoughtful and systemic review of terms that have been used in the literature to describe proteins that sample a heterogeneous set of structures during their biological lifetime. We agree that the term “intrinsically disordered proteins” (IDPs) is an appropriate single descriptor to refer to this particular class of proteins, although it does not fully capture much of the nuanced complexities that are inherent to this class. In what follows we suggest a refinement to this nomenclature based on an analysis of the underlying ensemble that describes the thermally accessible states of a given IDP. Taylor & Francis 2014-12-12 /pmc/articles/PMC5314908/ /pubmed/28232882 http://dx.doi.org/10.4161/idp.29700 Text en © 2014 The Author(s). Published with license by Taylor & Francis Group, LLC http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. The moral rights of the named author(s) have been asserted. |
spellingShingle | Commentary DaSilva, Linder C Gurry, Thomas Stultz, Collin M Toward a consensus in protein structure nomenclature |
title | Toward a consensus in protein structure nomenclature |
title_full | Toward a consensus in protein structure nomenclature |
title_fullStr | Toward a consensus in protein structure nomenclature |
title_full_unstemmed | Toward a consensus in protein structure nomenclature |
title_short | Toward a consensus in protein structure nomenclature |
title_sort | toward a consensus in protein structure nomenclature |
topic | Commentary |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5314908/ https://www.ncbi.nlm.nih.gov/pubmed/28232882 http://dx.doi.org/10.4161/idp.29700 |
work_keys_str_mv | AT dasilvalinderc towardaconsensusinproteinstructurenomenclature AT gurrythomas towardaconsensusinproteinstructurenomenclature AT stultzcollinm towardaconsensusinproteinstructurenomenclature |