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Toward a consensus in protein structure nomenclature

In a recent article, published in Intrinsically Disordered Proteins, a valuable consensus view regarding the nomenclature for disordered proteins was presented.(1) In this work the authors present a thoughtful and systemic review of terms that have been used in the literature to describe proteins th...

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Autores principales: DaSilva, Linder C, Gurry, Thomas, Stultz, Collin M
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5314908/
https://www.ncbi.nlm.nih.gov/pubmed/28232882
http://dx.doi.org/10.4161/idp.29700
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author DaSilva, Linder C
Gurry, Thomas
Stultz, Collin M
author_facet DaSilva, Linder C
Gurry, Thomas
Stultz, Collin M
author_sort DaSilva, Linder C
collection PubMed
description In a recent article, published in Intrinsically Disordered Proteins, a valuable consensus view regarding the nomenclature for disordered proteins was presented.(1) In this work the authors present a thoughtful and systemic review of terms that have been used in the literature to describe proteins that sample a heterogeneous set of structures during their biological lifetime. We agree that the term “intrinsically disordered proteins” (IDPs) is an appropriate single descriptor to refer to this particular class of proteins, although it does not fully capture much of the nuanced complexities that are inherent to this class. In what follows we suggest a refinement to this nomenclature based on an analysis of the underlying ensemble that describes the thermally accessible states of a given IDP.
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spelling pubmed-53149082017-02-23 Toward a consensus in protein structure nomenclature DaSilva, Linder C Gurry, Thomas Stultz, Collin M Intrinsically Disord Proteins Commentary In a recent article, published in Intrinsically Disordered Proteins, a valuable consensus view regarding the nomenclature for disordered proteins was presented.(1) In this work the authors present a thoughtful and systemic review of terms that have been used in the literature to describe proteins that sample a heterogeneous set of structures during their biological lifetime. We agree that the term “intrinsically disordered proteins” (IDPs) is an appropriate single descriptor to refer to this particular class of proteins, although it does not fully capture much of the nuanced complexities that are inherent to this class. In what follows we suggest a refinement to this nomenclature based on an analysis of the underlying ensemble that describes the thermally accessible states of a given IDP. Taylor & Francis 2014-12-12 /pmc/articles/PMC5314908/ /pubmed/28232882 http://dx.doi.org/10.4161/idp.29700 Text en © 2014 The Author(s). Published with license by Taylor & Francis Group, LLC http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. The moral rights of the named author(s) have been asserted.
spellingShingle Commentary
DaSilva, Linder C
Gurry, Thomas
Stultz, Collin M
Toward a consensus in protein structure nomenclature
title Toward a consensus in protein structure nomenclature
title_full Toward a consensus in protein structure nomenclature
title_fullStr Toward a consensus in protein structure nomenclature
title_full_unstemmed Toward a consensus in protein structure nomenclature
title_short Toward a consensus in protein structure nomenclature
title_sort toward a consensus in protein structure nomenclature
topic Commentary
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5314908/
https://www.ncbi.nlm.nih.gov/pubmed/28232882
http://dx.doi.org/10.4161/idp.29700
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