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Twenty microsatellite markers for the endangered Vatica mangachapoi (Dipterocarpaceae)(1)
PREMISE OF THE STUDY: Microsatellite markers were developed for Vatica mangachapoi (Dipterocarpaceae), an endangered species indigenous to Southeast Asia and southern China. METHODS AND RESULTS: Twenty microsatellite markers, including 12 polymorphic markers, were identified from V. mangachapoi usin...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5315383/ https://www.ncbi.nlm.nih.gov/pubmed/28224060 http://dx.doi.org/10.3732/apps.1600134 |
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author | Guo, Jun-Jie Shang, Shuai-Bin Wang, Chun-Sheng Zhao, Zhi-Gang Zeng, Jie |
author_facet | Guo, Jun-Jie Shang, Shuai-Bin Wang, Chun-Sheng Zhao, Zhi-Gang Zeng, Jie |
author_sort | Guo, Jun-Jie |
collection | PubMed |
description | PREMISE OF THE STUDY: Microsatellite markers were developed for Vatica mangachapoi (Dipterocarpaceae), an endangered species indigenous to Southeast Asia and southern China. METHODS AND RESULTS: Twenty microsatellite markers, including 12 polymorphic markers, were identified from V. mangachapoi using high-throughput sequencing. Polymorphism at each marker was evaluated using 87 individuals from three natural populations. The number of alleles per polymorphic locus ranged from six to 15, and the observed and expected heterozygosity varied from 0.000 to 0.926 and from 0.177 to 0.864, respectively. These markers were transferred successfully to the endangered species V. guangxiensis. CONCLUSIONS: These markers may be used to investigate the genetic diversity and gene flow of V. mangachapoi and V. guangxiensis. |
format | Online Article Text |
id | pubmed-5315383 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-53153832017-02-21 Twenty microsatellite markers for the endangered Vatica mangachapoi (Dipterocarpaceae)(1) Guo, Jun-Jie Shang, Shuai-Bin Wang, Chun-Sheng Zhao, Zhi-Gang Zeng, Jie Appl Plant Sci Primer Note PREMISE OF THE STUDY: Microsatellite markers were developed for Vatica mangachapoi (Dipterocarpaceae), an endangered species indigenous to Southeast Asia and southern China. METHODS AND RESULTS: Twenty microsatellite markers, including 12 polymorphic markers, were identified from V. mangachapoi using high-throughput sequencing. Polymorphism at each marker was evaluated using 87 individuals from three natural populations. The number of alleles per polymorphic locus ranged from six to 15, and the observed and expected heterozygosity varied from 0.000 to 0.926 and from 0.177 to 0.864, respectively. These markers were transferred successfully to the endangered species V. guangxiensis. CONCLUSIONS: These markers may be used to investigate the genetic diversity and gene flow of V. mangachapoi and V. guangxiensis. Botanical Society of America 2017-02-06 /pmc/articles/PMC5315383/ /pubmed/28224060 http://dx.doi.org/10.3732/apps.1600134 Text en © 2017 Guo et al. Published by the Botanical Society of America https://creativecommons.org/licenses/by-nc-sa/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (CC-BY-NC-SA 4.0 (https://creativecommons.org/licenses/by-nc-sa/4.0/) ), which permits unrestricted noncommercial use and redistribution provided that the original author and source are credited and the new work is distributed under the same license as the original. |
spellingShingle | Primer Note Guo, Jun-Jie Shang, Shuai-Bin Wang, Chun-Sheng Zhao, Zhi-Gang Zeng, Jie Twenty microsatellite markers for the endangered Vatica mangachapoi (Dipterocarpaceae)(1) |
title | Twenty microsatellite markers for the endangered Vatica mangachapoi (Dipterocarpaceae)(1) |
title_full | Twenty microsatellite markers for the endangered Vatica mangachapoi (Dipterocarpaceae)(1) |
title_fullStr | Twenty microsatellite markers for the endangered Vatica mangachapoi (Dipterocarpaceae)(1) |
title_full_unstemmed | Twenty microsatellite markers for the endangered Vatica mangachapoi (Dipterocarpaceae)(1) |
title_short | Twenty microsatellite markers for the endangered Vatica mangachapoi (Dipterocarpaceae)(1) |
title_sort | twenty microsatellite markers for the endangered vatica mangachapoi (dipterocarpaceae)(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5315383/ https://www.ncbi.nlm.nih.gov/pubmed/28224060 http://dx.doi.org/10.3732/apps.1600134 |
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