Cargando…

Genome-wide SNP Genotyping Resolves Signatures of Selection and Tetrasomic Recombination in Peanut

Peanut (Arachis hypogaea; 2n = 4x = 40) is a nutritious food and a good source of vitamins, minerals, and healthy fats. Expansion of genetic and genomic resources for genetic enhancement of cultivated peanut has gained momentum from the sequenced genomes of the diploid ancestors of cultivated peanut...

Descripción completa

Detalles Bibliográficos
Autores principales:	Clevenger, Josh, Chu, Ye, Chavarro, Carolina, Agarwal, Gaurav, Bertioli, David J., Leal-Bertioli, Soraya C.M., Pandey, Manish K., Vaughn, Justin, Abernathy, Brian, Barkley, Noelle A., Hovav, Ran, Burow, Mark, Nayak, Spurthi N., Chitikineni, Annapurna, Isleib, Thomas G., Holbrook, C. Corley, Jackson, Scott A., Varshney, Rajeev K., Ozias-Akins, Peggy
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2017
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5315502/ https://www.ncbi.nlm.nih.gov/pubmed/27993622 http://dx.doi.org/10.1016/j.molp.2016.11.015

Ejemplares similares

Tetrasomic Recombination Is Surprisingly Frequent in Allotetraploid Arachis
por: Leal-Bertioli, Soraya, et al.
Publicado: (2015)

Pod and Seed Trait QTL Identification To Assist Breeding for Peanut Market Preferences
por: Chavarro, Carolina, et al.
Publicado: (2020)

A new source of root-knot nematode resistance from Arachis stenosperma incorporated into allotetraploid peanut (Arachis hypogaea)
por: Ballén-Taborda, Carolina, et al.
Publicado: (2019)

Development and Genetic Characterization of Peanut Advanced Backcross Lines That Incorporate Root-Knot Nematode Resistance From Arachis stenosperma
por: Ballén-Taborda, Carolina, et al.
Publicado: (2022)

Gene expression profiling describes the genetic regulation of Meloidogyne arenaria resistance in Arachis hypogaea and reveals a candidate gene for resistance
por: Clevenger, Josh, et al.
Publicado: (2017)

Mapping Late Leaf Spot Resistance in Peanut (Arachis hypogaea) Using QTL-seq Reveals Markers for Marker-Assisted Selection
por: Clevenger, Josh, et al.
Publicado: (2018)

Development and Evaluation of a High Density Genotyping ‘Axiom_Arachis’ Array with 58 K SNPs for Accelerating Genetics and Breeding in Groundnut
por: Pandey, Manish K., et al.
Publicado: (2017)

Major QTLs for Resistance to Early and Late Leaf Spot Diseases Are Identified on Chromosomes 3 and 5 in Peanut (Arachis hypogaea)
por: Chu, Ye, et al.
Publicado: (2019)

Genotypic Regulation of Aflatoxin Accumulation but Not Aspergillus Fungal Growth upon Post-Harvest Infection of Peanut (Arachis hypogaea L.) Seeds
por: Korani, Walid Ahmed, et al.
Publicado: (2017)

The Use of SNP Markers for Linkage Mapping in Diploid and Tetraploid Peanuts
por: Bertioli, David J., et al.
Publicado: (2013)

Homoeologous recombination is recurrent in the nascent synthetic allotetraploid Arachis ipaënsis × Arachis correntina(4x) and its derivatives
por: Chu, Ye, et al.
Publicado: (2021)

Genetic insight and mapping of the pod constriction trait in Virginia-type peanut
por: Patil, Abhinandan S., et al.
Publicado: (2018)

Legacy genetics of Arachis cardenasii in the peanut crop shows the profound benefits of international seed exchange
por: Bertioli, David J., et al.
Publicado: (2021)

High‐density genetic map using whole‐genome resequencing for fine mapping and candidate gene discovery for disease resistance in peanut
por: Agarwal, Gaurav, et al.
Publicado: (2018)

Nested‐association mapping (NAM)‐based genetic dissection uncovers candidate genes for seed and pod weights in peanut (Arachis hypogaea)
por: Gangurde, Sunil S., et al.
Publicado: (2019)

TILLING by sequencing to identify induced mutations in stress resistance genes of peanut (Arachis hypogaea)
por: Guo, Yufang, et al.
Publicado: (2015)

Transcriptome Profile Reveals Drought-Induced Genes Preferentially Expressed in Response to Water Deficit in Cultivated Peanut (Arachis hypogaea L.)
por: Wang, Xu, et al.
Publicado: (2021)

RNA Sequencing of Contaminated Seeds Reveals the State of the Seed Permissive for Pre-Harvest Aflatoxin Contamination and Points to a Potential Susceptibility Factor
por: Clevenger, Josh, et al.
Publicado: (2016)

BAC libraries construction from the ancestral diploid genomes of the allotetraploid cultivated peanut
por: Guimarães, Patricia M, et al.
Publicado: (2008)

The functional biology of peanut allergens and possible links to their allergenicity
por: Ozias‐Akins, Peggy, et al.
Publicado: (2019)

Identification of consistent QTL for time to maturation in Virginia-type Peanut (Arachis hypogaea L.)
por: Kunta, Srinivas, et al.
Publicado: (2021)

Reference genes for quantitative reverse transcription-polymerase chain reaction expression studies in wild and cultivated peanut
por: Morgante, Carolina V, et al.
Publicado: (2011)

Genotypic Characterization of the U.S. Peanut Core Collection
por: Otyama, Paul I., et al.
Publicado: (2020)

TILLING for allergen reduction and improvement of quality traits in peanut (Arachis hypogaea L.)
por: Knoll, Joseph E, et al.
Publicado: (2011)

A first insight into the genetics of maturity trait in Runner × Virginia types peanut background
por: Kunta, Srinivas, et al.
Publicado: (2022)

Spontaneous generation of diversity in Arachis neopolyploids (Arachis ipaënsis × Arachis duranensis)(4x) replays the early stages of peanut evolution
por: Leal-Bertioli, Soraya C M, et al.
Publicado: (2021)

Comparison of SNP Calling Pipelines and NGS Platforms to Predict the Genomic Regions Harboring Candidate Genes for Nodulation in Cultivated Peanut
por: Peng, Ze, et al.
Publicado: (2020)

Global transcriptome analysis of two wild relatives of peanut under drought and fungi infection
por: Guimarães, Patricia M, et al.
Publicado: (2012)

SWEEP: A Tool for Filtering High-Quality SNPs in Polyploid Crops
por: Clevenger, Josh P., et al.
Publicado: (2015)

FIDEL—a retrovirus-like retrotransposon and its distinct evolutionary histories in the A- and B-genome components of cultivated peanut
por: Nielen, Stephan, et al.
Publicado: (2010)

Resistance to Thrips in Peanut and Implications for Management of Thrips and Thrips-Transmitted Orthotospoviruses in Peanut
por: Srinivasan, Rajagopalbabu, et al.
Publicado: (2018)

Brazilian Kayabi Indian accessions of peanut, Arachis hypogaea (Fabales, Fabaceae): origin, diversity and evolution
por: do Nascimento, Eliza Fabricio de Melo Bellard, et al.
Publicado: (2020)

Genotypic effect of ahFAD2 on fatty acid profiles in six segregating peanut (Arachis hypogaea L) populations
por: Barkley, Noelle A, et al.
Publicado: (2013)

Development and characterization of highly polymorphic long TC repeat microsatellite markers for genetic analysis of peanut
por: Macedo, Selma E, et al.
Publicado: (2012)

Comparing the Assembly and Handedness Dynamics of (H3.3-H4)(2) Tetrasomes to Canonical Tetrasomes
por: Vlijm, Rifka, et al.
Publicado: (2015)

A Developmental Transcriptome Map for Allotetraploid Arachis hypogaea
por: Clevenger, Josh, et al.
Publicado: (2016)

Introgression of wild alleles into the tetraploid peanut crop to improve water use efficiency, earliness and yield
por: Dutra, Wellison F., et al.
Publicado: (2018)

Identification of QTLs for Rust Resistance in the Peanut Wild Species Arachis magna and the Development of KASP Markers for Marker-Assisted Selection
por: Leal-Bertioli, Soraya C. M., et al.
Publicado: (2015)

Haplotype-Based Genotyping in Polyploids
por: Clevenger, Josh P., et al.
Publicado: (2018)

Bulk RNA-Seq Analysis Reveals Differentially Expressed Genes Associated with Lateral Branch Angle in Peanut
por: Ahmad, Naveed, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_0ae3pfthg8ubo8da5t1nqqiv5b