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Indications of chemical bond contrast in AFM images of a hydrogen-terminated silicon surface
The origin of bond-resolved atomic force microscope images remains controversial. Moreover, most work to date has involved planar, conjugated hydrocarbon molecules on a metal substrate thereby limiting knowledge of the generality of findings made about the imaging mechanism. Here we report the study...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5316802/ https://www.ncbi.nlm.nih.gov/pubmed/28194036 http://dx.doi.org/10.1038/ncomms14222 |
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author | Labidi, Hatem Koleini, Mohammad Huff, Taleana Salomons, Mark Cloutier, Martin Pitters, Jason Wolkow, Robert A. |
author_facet | Labidi, Hatem Koleini, Mohammad Huff, Taleana Salomons, Mark Cloutier, Martin Pitters, Jason Wolkow, Robert A. |
author_sort | Labidi, Hatem |
collection | PubMed |
description | The origin of bond-resolved atomic force microscope images remains controversial. Moreover, most work to date has involved planar, conjugated hydrocarbon molecules on a metal substrate thereby limiting knowledge of the generality of findings made about the imaging mechanism. Here we report the study of a very different sample; a hydrogen-terminated silicon surface. A procedure to obtain a passivated hydrogen-functionalized tip is defined and evolution of atomic force microscopy images at different tip elevations are shown. At relatively large tip-sample distances, the topmost atoms appear as distinct protrusions. However, on decreasing the tip-sample distance, features consistent with the silicon covalent bonds of the surface emerge. Using a density functional tight-binding-based method to simulate atomic force microscopy images, we reproduce the experimental results. The role of the tip flexibility and the nature of bonds and false bond-like features are discussed. |
format | Online Article Text |
id | pubmed-5316802 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-53168022017-02-27 Indications of chemical bond contrast in AFM images of a hydrogen-terminated silicon surface Labidi, Hatem Koleini, Mohammad Huff, Taleana Salomons, Mark Cloutier, Martin Pitters, Jason Wolkow, Robert A. Nat Commun Article The origin of bond-resolved atomic force microscope images remains controversial. Moreover, most work to date has involved planar, conjugated hydrocarbon molecules on a metal substrate thereby limiting knowledge of the generality of findings made about the imaging mechanism. Here we report the study of a very different sample; a hydrogen-terminated silicon surface. A procedure to obtain a passivated hydrogen-functionalized tip is defined and evolution of atomic force microscopy images at different tip elevations are shown. At relatively large tip-sample distances, the topmost atoms appear as distinct protrusions. However, on decreasing the tip-sample distance, features consistent with the silicon covalent bonds of the surface emerge. Using a density functional tight-binding-based method to simulate atomic force microscopy images, we reproduce the experimental results. The role of the tip flexibility and the nature of bonds and false bond-like features are discussed. Nature Publishing Group 2017-02-13 /pmc/articles/PMC5316802/ /pubmed/28194036 http://dx.doi.org/10.1038/ncomms14222 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Labidi, Hatem Koleini, Mohammad Huff, Taleana Salomons, Mark Cloutier, Martin Pitters, Jason Wolkow, Robert A. Indications of chemical bond contrast in AFM images of a hydrogen-terminated silicon surface |
title | Indications of chemical bond contrast in AFM images of a hydrogen-terminated silicon surface |
title_full | Indications of chemical bond contrast in AFM images of a hydrogen-terminated silicon surface |
title_fullStr | Indications of chemical bond contrast in AFM images of a hydrogen-terminated silicon surface |
title_full_unstemmed | Indications of chemical bond contrast in AFM images of a hydrogen-terminated silicon surface |
title_short | Indications of chemical bond contrast in AFM images of a hydrogen-terminated silicon surface |
title_sort | indications of chemical bond contrast in afm images of a hydrogen-terminated silicon surface |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5316802/ https://www.ncbi.nlm.nih.gov/pubmed/28194036 http://dx.doi.org/10.1038/ncomms14222 |
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