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Generalized min-max bound-based MRI pulse sequence design framework for wide-range T(1) relaxometry: A case study on the tissue specific imaging sequence

This paper proposes a new design strategy for optimizing MRI pulse sequences for T(1) relaxometry. The design strategy optimizes the pulse sequence parameters to minimize the maximum variance of unbiased T(1) estimates over a range of T(1) values using the Cramér-Rao bound. In contrast to prior sequ...

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Detalles Bibliográficos
Autores principales: Liu, Yang, Buck, John R., Ikonomidou, Vasiliki N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5319767/
https://www.ncbi.nlm.nih.gov/pubmed/28222197
http://dx.doi.org/10.1371/journal.pone.0172573
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author Liu, Yang
Buck, John R.
Ikonomidou, Vasiliki N.
author_facet Liu, Yang
Buck, John R.
Ikonomidou, Vasiliki N.
author_sort Liu, Yang
collection PubMed
description This paper proposes a new design strategy for optimizing MRI pulse sequences for T(1) relaxometry. The design strategy optimizes the pulse sequence parameters to minimize the maximum variance of unbiased T(1) estimates over a range of T(1) values using the Cramér-Rao bound. In contrast to prior sequences optimized for a single nominal T(1) value, the optimized sequence using our bound-based strategy achieves improved precision and accuracy for a broad range of T(1) estimates within a clinically feasible scan time. The optimization combines the downhill simplex method with a simulated annealing process. To show the effectiveness of the proposed strategy, we optimize the tissue specific imaging (TSI) sequence. Preliminary Monte Carlo simulations demonstrate that the optimized TSI sequence yields improved precision and accuracy over the popular driven-equilibrium single-pulse observation of T(1) (DESPOT1) approach for normal brain tissues (estimated T(1) 700–2000 ms at 3.0T). The relative mean estimation error (MSE) for T(1) estimation is less than 1.7% using the optimized TSI sequence, as opposed to less than 7.0% using DESPOT1 for normal brain tissues. The optimized TSI sequence achieves good stability by keeping the MSE under 7.0% over larger T(1) values corresponding to different lesion tissues and the cerebrospinal fluid (up to 5000 ms). The T(1) estimation accuracy using the new pulse sequence also shows improvement, which is more pronounced in low SNR scenarios.
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spelling pubmed-53197672017-03-03 Generalized min-max bound-based MRI pulse sequence design framework for wide-range T(1) relaxometry: A case study on the tissue specific imaging sequence Liu, Yang Buck, John R. Ikonomidou, Vasiliki N. PLoS One Research Article This paper proposes a new design strategy for optimizing MRI pulse sequences for T(1) relaxometry. The design strategy optimizes the pulse sequence parameters to minimize the maximum variance of unbiased T(1) estimates over a range of T(1) values using the Cramér-Rao bound. In contrast to prior sequences optimized for a single nominal T(1) value, the optimized sequence using our bound-based strategy achieves improved precision and accuracy for a broad range of T(1) estimates within a clinically feasible scan time. The optimization combines the downhill simplex method with a simulated annealing process. To show the effectiveness of the proposed strategy, we optimize the tissue specific imaging (TSI) sequence. Preliminary Monte Carlo simulations demonstrate that the optimized TSI sequence yields improved precision and accuracy over the popular driven-equilibrium single-pulse observation of T(1) (DESPOT1) approach for normal brain tissues (estimated T(1) 700–2000 ms at 3.0T). The relative mean estimation error (MSE) for T(1) estimation is less than 1.7% using the optimized TSI sequence, as opposed to less than 7.0% using DESPOT1 for normal brain tissues. The optimized TSI sequence achieves good stability by keeping the MSE under 7.0% over larger T(1) values corresponding to different lesion tissues and the cerebrospinal fluid (up to 5000 ms). The T(1) estimation accuracy using the new pulse sequence also shows improvement, which is more pronounced in low SNR scenarios. Public Library of Science 2017-02-21 /pmc/articles/PMC5319767/ /pubmed/28222197 http://dx.doi.org/10.1371/journal.pone.0172573 Text en © 2017 Liu et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Liu, Yang
Buck, John R.
Ikonomidou, Vasiliki N.
Generalized min-max bound-based MRI pulse sequence design framework for wide-range T(1) relaxometry: A case study on the tissue specific imaging sequence
title Generalized min-max bound-based MRI pulse sequence design framework for wide-range T(1) relaxometry: A case study on the tissue specific imaging sequence
title_full Generalized min-max bound-based MRI pulse sequence design framework for wide-range T(1) relaxometry: A case study on the tissue specific imaging sequence
title_fullStr Generalized min-max bound-based MRI pulse sequence design framework for wide-range T(1) relaxometry: A case study on the tissue specific imaging sequence
title_full_unstemmed Generalized min-max bound-based MRI pulse sequence design framework for wide-range T(1) relaxometry: A case study on the tissue specific imaging sequence
title_short Generalized min-max bound-based MRI pulse sequence design framework for wide-range T(1) relaxometry: A case study on the tissue specific imaging sequence
title_sort generalized min-max bound-based mri pulse sequence design framework for wide-range t(1) relaxometry: a case study on the tissue specific imaging sequence
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5319767/
https://www.ncbi.nlm.nih.gov/pubmed/28222197
http://dx.doi.org/10.1371/journal.pone.0172573
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