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Response of Bacterial Communities to Different Detritus Compositions in Arctic Deep-Sea Sediments
Benthic deep-sea communities are largely dependent on particle flux from surface waters. In the Arctic Ocean, environmental changes occur more rapidly than in other ocean regions, and have major effects on the export of organic matter to the deep sea. Because bacteria constitute the majority of deep...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5323390/ https://www.ncbi.nlm.nih.gov/pubmed/28286496 http://dx.doi.org/10.3389/fmicb.2017.00266 |
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author | Hoffmann, Katy Hassenrück, Christiane Salman-Carvalho, Verena Holtappels, Moritz Bienhold, Christina |
author_facet | Hoffmann, Katy Hassenrück, Christiane Salman-Carvalho, Verena Holtappels, Moritz Bienhold, Christina |
author_sort | Hoffmann, Katy |
collection | PubMed |
description | Benthic deep-sea communities are largely dependent on particle flux from surface waters. In the Arctic Ocean, environmental changes occur more rapidly than in other ocean regions, and have major effects on the export of organic matter to the deep sea. Because bacteria constitute the majority of deep-sea benthic biomass and influence global element cycles, it is important to better understand how changes in organic matter input will affect bacterial communities at the Arctic seafloor. In a multidisciplinary ex situ experiment, benthic bacterial deep-sea communities from the Long-Term Ecological Research Observatory HAUSGARTEN were supplemented with different types of habitat-related detritus (chitin, Arctic algae) and incubated for 23 days under in situ conditions. Chitin addition caused strong changes in community activity, while community structure remained similar to unfed control incubations. In contrast, the addition of phytodetritus resulted in strong changes in community composition, accompanied by increased community activity, indicating the need for adaptation in these treatments. High-throughput sequencing of the 16S rRNA gene and 16S rRNA revealed distinct taxonomic groups of potentially fast-growing, opportunistic bacteria in the different detritus treatments. Compared to the unfed control, Colwelliaceae, Psychromonadaceae, and Oceanospirillaceae increased in relative abundance in the chitin treatment, whereas Flavobacteriaceae, Marinilabiaceae, and Pseudoalteromonadaceae increased in the phytodetritus treatments. Hence, these groups may constitute indicator taxa for the different organic matter sources at this study site. In summary, differences in community structure and in the uptake and remineralization of carbon in the different treatments suggest an effect of organic matter quality on bacterial diversity as well as on carbon turnover at the seafloor, an important feedback mechanism to be considered in future climate change scenarios. |
format | Online Article Text |
id | pubmed-5323390 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-53233902017-03-10 Response of Bacterial Communities to Different Detritus Compositions in Arctic Deep-Sea Sediments Hoffmann, Katy Hassenrück, Christiane Salman-Carvalho, Verena Holtappels, Moritz Bienhold, Christina Front Microbiol Microbiology Benthic deep-sea communities are largely dependent on particle flux from surface waters. In the Arctic Ocean, environmental changes occur more rapidly than in other ocean regions, and have major effects on the export of organic matter to the deep sea. Because bacteria constitute the majority of deep-sea benthic biomass and influence global element cycles, it is important to better understand how changes in organic matter input will affect bacterial communities at the Arctic seafloor. In a multidisciplinary ex situ experiment, benthic bacterial deep-sea communities from the Long-Term Ecological Research Observatory HAUSGARTEN were supplemented with different types of habitat-related detritus (chitin, Arctic algae) and incubated for 23 days under in situ conditions. Chitin addition caused strong changes in community activity, while community structure remained similar to unfed control incubations. In contrast, the addition of phytodetritus resulted in strong changes in community composition, accompanied by increased community activity, indicating the need for adaptation in these treatments. High-throughput sequencing of the 16S rRNA gene and 16S rRNA revealed distinct taxonomic groups of potentially fast-growing, opportunistic bacteria in the different detritus treatments. Compared to the unfed control, Colwelliaceae, Psychromonadaceae, and Oceanospirillaceae increased in relative abundance in the chitin treatment, whereas Flavobacteriaceae, Marinilabiaceae, and Pseudoalteromonadaceae increased in the phytodetritus treatments. Hence, these groups may constitute indicator taxa for the different organic matter sources at this study site. In summary, differences in community structure and in the uptake and remineralization of carbon in the different treatments suggest an effect of organic matter quality on bacterial diversity as well as on carbon turnover at the seafloor, an important feedback mechanism to be considered in future climate change scenarios. Frontiers Media S.A. 2017-02-24 /pmc/articles/PMC5323390/ /pubmed/28286496 http://dx.doi.org/10.3389/fmicb.2017.00266 Text en Copyright © 2017 Hoffmann, Hassenrück, Salman-Carvalho, Holtappels and Bienhold. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Hoffmann, Katy Hassenrück, Christiane Salman-Carvalho, Verena Holtappels, Moritz Bienhold, Christina Response of Bacterial Communities to Different Detritus Compositions in Arctic Deep-Sea Sediments |
title | Response of Bacterial Communities to Different Detritus Compositions in Arctic Deep-Sea Sediments |
title_full | Response of Bacterial Communities to Different Detritus Compositions in Arctic Deep-Sea Sediments |
title_fullStr | Response of Bacterial Communities to Different Detritus Compositions in Arctic Deep-Sea Sediments |
title_full_unstemmed | Response of Bacterial Communities to Different Detritus Compositions in Arctic Deep-Sea Sediments |
title_short | Response of Bacterial Communities to Different Detritus Compositions in Arctic Deep-Sea Sediments |
title_sort | response of bacterial communities to different detritus compositions in arctic deep-sea sediments |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5323390/ https://www.ncbi.nlm.nih.gov/pubmed/28286496 http://dx.doi.org/10.3389/fmicb.2017.00266 |
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