Cargando…

On the stability and dynamics of stochastic spiking neuron models: Nonlinear Hawkes process and point process GLMs

Point process generalized linear models (PP-GLMs) provide an important statistical framework for modeling spiking activity in single-neurons and neuronal networks. Stochastic stability is essential when sampling from these models, as done in computational neuroscience to analyze statistical properti...

Descripción completa

Detalles Bibliográficos
Autores principales: Gerhard, Felipe, Deger, Moritz, Truccolo, Wilson
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5325182/
https://www.ncbi.nlm.nih.gov/pubmed/28234899
http://dx.doi.org/10.1371/journal.pcbi.1005390
_version_ 1782510329849184256
author Gerhard, Felipe
Deger, Moritz
Truccolo, Wilson
author_facet Gerhard, Felipe
Deger, Moritz
Truccolo, Wilson
author_sort Gerhard, Felipe
collection PubMed
description Point process generalized linear models (PP-GLMs) provide an important statistical framework for modeling spiking activity in single-neurons and neuronal networks. Stochastic stability is essential when sampling from these models, as done in computational neuroscience to analyze statistical properties of neuronal dynamics and in neuro-engineering to implement closed-loop applications. Here we show, however, that despite passing common goodness-of-fit tests, PP-GLMs estimated from data are often unstable, leading to divergent firing rates. The inclusion of absolute refractory periods is not a satisfactory solution since the activity then typically settles into unphysiological rates. To address these issues, we derive a framework for determining the existence and stability of fixed points of the expected conditional intensity function (CIF) for general PP-GLMs. Specifically, in nonlinear Hawkes PP-GLMs, the CIF is expressed as a function of the previous spike history and exogenous inputs. We use a mean-field quasi-renewal (QR) approximation that decomposes spike history effects into the contribution of the last spike and an average of the CIF over all spike histories prior to the last spike. Fixed points for stationary rates are derived as self-consistent solutions of integral equations. Bifurcation analysis and the number of fixed points predict that the original models can show stable, divergent, and metastable (fragile) dynamics. For fragile models, fluctuations of the single-neuron dynamics predict expected divergence times after which rates approach unphysiologically high values. This metric can be used to estimate the probability of rates to remain physiological for given time periods, e.g., for simulation purposes. We demonstrate the use of the stability framework using simulated single-neuron examples and neurophysiological recordings. Finally, we show how to adapt PP-GLM estimation procedures to guarantee model stability. Overall, our results provide a stability framework for data-driven PP-GLMs and shed new light on the stochastic dynamics of state-of-the-art statistical models of neuronal spiking activity.
format Online
Article
Text
id pubmed-5325182
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-53251822017-03-09 On the stability and dynamics of stochastic spiking neuron models: Nonlinear Hawkes process and point process GLMs Gerhard, Felipe Deger, Moritz Truccolo, Wilson PLoS Comput Biol Research Article Point process generalized linear models (PP-GLMs) provide an important statistical framework for modeling spiking activity in single-neurons and neuronal networks. Stochastic stability is essential when sampling from these models, as done in computational neuroscience to analyze statistical properties of neuronal dynamics and in neuro-engineering to implement closed-loop applications. Here we show, however, that despite passing common goodness-of-fit tests, PP-GLMs estimated from data are often unstable, leading to divergent firing rates. The inclusion of absolute refractory periods is not a satisfactory solution since the activity then typically settles into unphysiological rates. To address these issues, we derive a framework for determining the existence and stability of fixed points of the expected conditional intensity function (CIF) for general PP-GLMs. Specifically, in nonlinear Hawkes PP-GLMs, the CIF is expressed as a function of the previous spike history and exogenous inputs. We use a mean-field quasi-renewal (QR) approximation that decomposes spike history effects into the contribution of the last spike and an average of the CIF over all spike histories prior to the last spike. Fixed points for stationary rates are derived as self-consistent solutions of integral equations. Bifurcation analysis and the number of fixed points predict that the original models can show stable, divergent, and metastable (fragile) dynamics. For fragile models, fluctuations of the single-neuron dynamics predict expected divergence times after which rates approach unphysiologically high values. This metric can be used to estimate the probability of rates to remain physiological for given time periods, e.g., for simulation purposes. We demonstrate the use of the stability framework using simulated single-neuron examples and neurophysiological recordings. Finally, we show how to adapt PP-GLM estimation procedures to guarantee model stability. Overall, our results provide a stability framework for data-driven PP-GLMs and shed new light on the stochastic dynamics of state-of-the-art statistical models of neuronal spiking activity. Public Library of Science 2017-02-24 /pmc/articles/PMC5325182/ /pubmed/28234899 http://dx.doi.org/10.1371/journal.pcbi.1005390 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Research Article
Gerhard, Felipe
Deger, Moritz
Truccolo, Wilson
On the stability and dynamics of stochastic spiking neuron models: Nonlinear Hawkes process and point process GLMs
title On the stability and dynamics of stochastic spiking neuron models: Nonlinear Hawkes process and point process GLMs
title_full On the stability and dynamics of stochastic spiking neuron models: Nonlinear Hawkes process and point process GLMs
title_fullStr On the stability and dynamics of stochastic spiking neuron models: Nonlinear Hawkes process and point process GLMs
title_full_unstemmed On the stability and dynamics of stochastic spiking neuron models: Nonlinear Hawkes process and point process GLMs
title_short On the stability and dynamics of stochastic spiking neuron models: Nonlinear Hawkes process and point process GLMs
title_sort on the stability and dynamics of stochastic spiking neuron models: nonlinear hawkes process and point process glms
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5325182/
https://www.ncbi.nlm.nih.gov/pubmed/28234899
http://dx.doi.org/10.1371/journal.pcbi.1005390
work_keys_str_mv AT gerhardfelipe onthestabilityanddynamicsofstochasticspikingneuronmodelsnonlinearhawkesprocessandpointprocessglms
AT degermoritz onthestabilityanddynamicsofstochasticspikingneuronmodelsnonlinearhawkesprocessandpointprocessglms
AT truccolowilson onthestabilityanddynamicsofstochasticspikingneuronmodelsnonlinearhawkesprocessandpointprocessglms