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Genome-wide association analyses for lung function and chronic obstructive pulmonary disease identify new loci and potential druggable targets

Chronic Obstructive Pulmonary Disease (COPD) is characterised by reduced lung function and is the third leading cause of death globally. Through genome-wide association discovery in 48,943 individuals, selected from extremes of the lung function distribution in UK Biobank, and follow-up in 95,375 in...

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Autores principales: Wain, Louise V, Shrine, Nick, Soler Artigas, María, Erzurumluoglu, A Mesut, Noyvert, Boris, Bossini-Castillo, Lara, Obeidat, Ma’en, Henry, Amanda P, Portelli, Michael A, Hall, Robert J, Billington, Charlotte K, Rimington, Tracy L, Fenech, Anthony G, John, Catherine, Blake, Tineka, Jackson, Victoria E, Allen, Richard J, Prins, Bram P, Campbell, Archie, Porteous, David J, Jarvelin, Marjo-Riitta, Wielscher, Matthias, James, Alan L, Hui, Jennie, Wareham, Nicholas J, Zhao, Jing Hua, Wilson, James F, Joshi, Peter K, Stubbe, Beate, Rawal, Rajesh, Schulz, Holger, Imboden, Medea, Probst-Hensch, Nicole M, Karrasch, Stefan, Gieger, Christian, Deary, Ian J, Harris, Sarah E, Marten, Jonathan, Rudan, Igor, Enroth, Stefan, Gyllensten, Ulf, Kerr, Shona M, Polasek, Ozren, Kähönen, Mika, Surakka, Ida, Vitart, Veronique, Hayward, Caroline, Lehtimäki, Terho, Raitakari, Olli T, Evans, David M, Henderson, A John, Pennell, Craig E, Wang, Carol A, Sly, Peter D, Wan, Emily S, Busch, Robert, Hobbs, Brian D, Litonjua, Augusto A, Sparrow, David W, Gulsvik, Amund, Bakke, Per S, Crapo, James D, Beaty, Terri H, Hansel, Nadia N, Mathias, Rasika A, Ruczinski, Ingo, Barnes, Kathleen C, Bossé, Yohan, Joubert, Philippe, van den Berge, Maarten, Brandsma, Corry-Anke, Paré, Peter D, Sin, Don D, Nickle, David C, Hao, Ke, Gottesman, Omri, Dewey, Frederick E, Bruse, Shannon E, Carey, David J, Kirchner, H Lester, Jonsson, Stefan, Thorleifsson, Gudmar, Jonsdottir, Ingileif, Gislason, Thorarinn, Stefansson, Kari, Schurmann, Claudia, Nadkarni, Girish, Bottinger, Erwin P, Loos, Ruth JF, Walters, Robin G, Chen, Zhengming, Millwood, Iona Y, Vaucher, Julien, Kurmi, Om P, Li, Liming, Hansell, Anna L, Brightling, Chris, Zeggini, Eleftheria, Cho, Michael H, Silverman, Edwin K, Sayers, Ian, Trynka, Gosia, Morris, Andrew P, Strachan, David P, Hall, Ian P, Tobin, Martin D
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5326681/
https://www.ncbi.nlm.nih.gov/pubmed/28166213
http://dx.doi.org/10.1038/ng.3787
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author Wain, Louise V
Shrine, Nick
Soler Artigas, María
Erzurumluoglu, A Mesut
Noyvert, Boris
Bossini-Castillo, Lara
Obeidat, Ma’en
Henry, Amanda P
Portelli, Michael A
Hall, Robert J
Billington, Charlotte K
Rimington, Tracy L
Fenech, Anthony G
John, Catherine
Blake, Tineka
Jackson, Victoria E
Allen, Richard J
Prins, Bram P
Campbell, Archie
Porteous, David J
Jarvelin, Marjo-Riitta
Wielscher, Matthias
James, Alan L
Hui, Jennie
Wareham, Nicholas J
Zhao, Jing Hua
Wilson, James F
Joshi, Peter K
Stubbe, Beate
Rawal, Rajesh
Schulz, Holger
Imboden, Medea
Probst-Hensch, Nicole M
Karrasch, Stefan
Gieger, Christian
Deary, Ian J
Harris, Sarah E
Marten, Jonathan
Rudan, Igor
Enroth, Stefan
Gyllensten, Ulf
Kerr, Shona M
Polasek, Ozren
Kähönen, Mika
Surakka, Ida
Vitart, Veronique
Hayward, Caroline
Lehtimäki, Terho
Raitakari, Olli T
Evans, David M
Henderson, A John
Pennell, Craig E
Wang, Carol A
Sly, Peter D
Wan, Emily S
Busch, Robert
Hobbs, Brian D
Litonjua, Augusto A
Sparrow, David W
Gulsvik, Amund
Bakke, Per S
Crapo, James D
Beaty, Terri H
Hansel, Nadia N
Mathias, Rasika A
Ruczinski, Ingo
Barnes, Kathleen C
Bossé, Yohan
Joubert, Philippe
van den Berge, Maarten
Brandsma, Corry-Anke
Paré, Peter D
Sin, Don D
Nickle, David C
Hao, Ke
Gottesman, Omri
Dewey, Frederick E
Bruse, Shannon E
Carey, David J
Kirchner, H Lester
Jonsson, Stefan
Thorleifsson, Gudmar
Jonsdottir, Ingileif
Gislason, Thorarinn
Stefansson, Kari
Schurmann, Claudia
Nadkarni, Girish
Bottinger, Erwin P
Loos, Ruth JF
Walters, Robin G
Chen, Zhengming
Millwood, Iona Y
Vaucher, Julien
Kurmi, Om P
Li, Liming
Hansell, Anna L
Brightling, Chris
Zeggini, Eleftheria
Cho, Michael H
Silverman, Edwin K
Sayers, Ian
Trynka, Gosia
Morris, Andrew P
Strachan, David P
Hall, Ian P
Tobin, Martin D
author_facet Wain, Louise V
Shrine, Nick
Soler Artigas, María
Erzurumluoglu, A Mesut
Noyvert, Boris
Bossini-Castillo, Lara
Obeidat, Ma’en
Henry, Amanda P
Portelli, Michael A
Hall, Robert J
Billington, Charlotte K
Rimington, Tracy L
Fenech, Anthony G
John, Catherine
Blake, Tineka
Jackson, Victoria E
Allen, Richard J
Prins, Bram P
Campbell, Archie
Porteous, David J
Jarvelin, Marjo-Riitta
Wielscher, Matthias
James, Alan L
Hui, Jennie
Wareham, Nicholas J
Zhao, Jing Hua
Wilson, James F
Joshi, Peter K
Stubbe, Beate
Rawal, Rajesh
Schulz, Holger
Imboden, Medea
Probst-Hensch, Nicole M
Karrasch, Stefan
Gieger, Christian
Deary, Ian J
Harris, Sarah E
Marten, Jonathan
Rudan, Igor
Enroth, Stefan
Gyllensten, Ulf
Kerr, Shona M
Polasek, Ozren
Kähönen, Mika
Surakka, Ida
Vitart, Veronique
Hayward, Caroline
Lehtimäki, Terho
Raitakari, Olli T
Evans, David M
Henderson, A John
Pennell, Craig E
Wang, Carol A
Sly, Peter D
Wan, Emily S
Busch, Robert
Hobbs, Brian D
Litonjua, Augusto A
Sparrow, David W
Gulsvik, Amund
Bakke, Per S
Crapo, James D
Beaty, Terri H
Hansel, Nadia N
Mathias, Rasika A
Ruczinski, Ingo
Barnes, Kathleen C
Bossé, Yohan
Joubert, Philippe
van den Berge, Maarten
Brandsma, Corry-Anke
Paré, Peter D
Sin, Don D
Nickle, David C
Hao, Ke
Gottesman, Omri
Dewey, Frederick E
Bruse, Shannon E
Carey, David J
Kirchner, H Lester
Jonsson, Stefan
Thorleifsson, Gudmar
Jonsdottir, Ingileif
Gislason, Thorarinn
Stefansson, Kari
Schurmann, Claudia
Nadkarni, Girish
Bottinger, Erwin P
Loos, Ruth JF
Walters, Robin G
Chen, Zhengming
Millwood, Iona Y
Vaucher, Julien
Kurmi, Om P
Li, Liming
Hansell, Anna L
Brightling, Chris
Zeggini, Eleftheria
Cho, Michael H
Silverman, Edwin K
Sayers, Ian
Trynka, Gosia
Morris, Andrew P
Strachan, David P
Hall, Ian P
Tobin, Martin D
author_sort Wain, Louise V
collection PubMed
description Chronic Obstructive Pulmonary Disease (COPD) is characterised by reduced lung function and is the third leading cause of death globally. Through genome-wide association discovery in 48,943 individuals, selected from extremes of the lung function distribution in UK Biobank, and follow-up in 95,375 individuals, we increased the yield of independent signals for lung function from 54 to 97. A genetic risk score was associated with COPD susceptibility (odds ratios per standard deviation of the risk score (~6 alleles) (95% confidence interval) 1.24 (1.20-1.27), P=5.05x10(-49)) and we observed a 3.7 fold difference in COPD risk between highest and lowest genetic risk score deciles in UK Biobank. The 97 signals show enrichment in development, elastic fibres and epigenetic regulation pathways. We highlight targets for drugs and compounds in development for COPD and asthma (genes in the inositol phosphate metabolism pathway and CHRM3) and describe targets for potential drug repositioning from other clinical indications.
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spelling pubmed-53266812017-08-06 Genome-wide association analyses for lung function and chronic obstructive pulmonary disease identify new loci and potential druggable targets Wain, Louise V Shrine, Nick Soler Artigas, María Erzurumluoglu, A Mesut Noyvert, Boris Bossini-Castillo, Lara Obeidat, Ma’en Henry, Amanda P Portelli, Michael A Hall, Robert J Billington, Charlotte K Rimington, Tracy L Fenech, Anthony G John, Catherine Blake, Tineka Jackson, Victoria E Allen, Richard J Prins, Bram P Campbell, Archie Porteous, David J Jarvelin, Marjo-Riitta Wielscher, Matthias James, Alan L Hui, Jennie Wareham, Nicholas J Zhao, Jing Hua Wilson, James F Joshi, Peter K Stubbe, Beate Rawal, Rajesh Schulz, Holger Imboden, Medea Probst-Hensch, Nicole M Karrasch, Stefan Gieger, Christian Deary, Ian J Harris, Sarah E Marten, Jonathan Rudan, Igor Enroth, Stefan Gyllensten, Ulf Kerr, Shona M Polasek, Ozren Kähönen, Mika Surakka, Ida Vitart, Veronique Hayward, Caroline Lehtimäki, Terho Raitakari, Olli T Evans, David M Henderson, A John Pennell, Craig E Wang, Carol A Sly, Peter D Wan, Emily S Busch, Robert Hobbs, Brian D Litonjua, Augusto A Sparrow, David W Gulsvik, Amund Bakke, Per S Crapo, James D Beaty, Terri H Hansel, Nadia N Mathias, Rasika A Ruczinski, Ingo Barnes, Kathleen C Bossé, Yohan Joubert, Philippe van den Berge, Maarten Brandsma, Corry-Anke Paré, Peter D Sin, Don D Nickle, David C Hao, Ke Gottesman, Omri Dewey, Frederick E Bruse, Shannon E Carey, David J Kirchner, H Lester Jonsson, Stefan Thorleifsson, Gudmar Jonsdottir, Ingileif Gislason, Thorarinn Stefansson, Kari Schurmann, Claudia Nadkarni, Girish Bottinger, Erwin P Loos, Ruth JF Walters, Robin G Chen, Zhengming Millwood, Iona Y Vaucher, Julien Kurmi, Om P Li, Liming Hansell, Anna L Brightling, Chris Zeggini, Eleftheria Cho, Michael H Silverman, Edwin K Sayers, Ian Trynka, Gosia Morris, Andrew P Strachan, David P Hall, Ian P Tobin, Martin D Nat Genet Article Chronic Obstructive Pulmonary Disease (COPD) is characterised by reduced lung function and is the third leading cause of death globally. Through genome-wide association discovery in 48,943 individuals, selected from extremes of the lung function distribution in UK Biobank, and follow-up in 95,375 individuals, we increased the yield of independent signals for lung function from 54 to 97. A genetic risk score was associated with COPD susceptibility (odds ratios per standard deviation of the risk score (~6 alleles) (95% confidence interval) 1.24 (1.20-1.27), P=5.05x10(-49)) and we observed a 3.7 fold difference in COPD risk between highest and lowest genetic risk score deciles in UK Biobank. The 97 signals show enrichment in development, elastic fibres and epigenetic regulation pathways. We highlight targets for drugs and compounds in development for COPD and asthma (genes in the inositol phosphate metabolism pathway and CHRM3) and describe targets for potential drug repositioning from other clinical indications. 2017-02-06 2017-03 /pmc/articles/PMC5326681/ /pubmed/28166213 http://dx.doi.org/10.1038/ng.3787 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Wain, Louise V
Shrine, Nick
Soler Artigas, María
Erzurumluoglu, A Mesut
Noyvert, Boris
Bossini-Castillo, Lara
Obeidat, Ma’en
Henry, Amanda P
Portelli, Michael A
Hall, Robert J
Billington, Charlotte K
Rimington, Tracy L
Fenech, Anthony G
John, Catherine
Blake, Tineka
Jackson, Victoria E
Allen, Richard J
Prins, Bram P
Campbell, Archie
Porteous, David J
Jarvelin, Marjo-Riitta
Wielscher, Matthias
James, Alan L
Hui, Jennie
Wareham, Nicholas J
Zhao, Jing Hua
Wilson, James F
Joshi, Peter K
Stubbe, Beate
Rawal, Rajesh
Schulz, Holger
Imboden, Medea
Probst-Hensch, Nicole M
Karrasch, Stefan
Gieger, Christian
Deary, Ian J
Harris, Sarah E
Marten, Jonathan
Rudan, Igor
Enroth, Stefan
Gyllensten, Ulf
Kerr, Shona M
Polasek, Ozren
Kähönen, Mika
Surakka, Ida
Vitart, Veronique
Hayward, Caroline
Lehtimäki, Terho
Raitakari, Olli T
Evans, David M
Henderson, A John
Pennell, Craig E
Wang, Carol A
Sly, Peter D
Wan, Emily S
Busch, Robert
Hobbs, Brian D
Litonjua, Augusto A
Sparrow, David W
Gulsvik, Amund
Bakke, Per S
Crapo, James D
Beaty, Terri H
Hansel, Nadia N
Mathias, Rasika A
Ruczinski, Ingo
Barnes, Kathleen C
Bossé, Yohan
Joubert, Philippe
van den Berge, Maarten
Brandsma, Corry-Anke
Paré, Peter D
Sin, Don D
Nickle, David C
Hao, Ke
Gottesman, Omri
Dewey, Frederick E
Bruse, Shannon E
Carey, David J
Kirchner, H Lester
Jonsson, Stefan
Thorleifsson, Gudmar
Jonsdottir, Ingileif
Gislason, Thorarinn
Stefansson, Kari
Schurmann, Claudia
Nadkarni, Girish
Bottinger, Erwin P
Loos, Ruth JF
Walters, Robin G
Chen, Zhengming
Millwood, Iona Y
Vaucher, Julien
Kurmi, Om P
Li, Liming
Hansell, Anna L
Brightling, Chris
Zeggini, Eleftheria
Cho, Michael H
Silverman, Edwin K
Sayers, Ian
Trynka, Gosia
Morris, Andrew P
Strachan, David P
Hall, Ian P
Tobin, Martin D
Genome-wide association analyses for lung function and chronic obstructive pulmonary disease identify new loci and potential druggable targets
title Genome-wide association analyses for lung function and chronic obstructive pulmonary disease identify new loci and potential druggable targets
title_full Genome-wide association analyses for lung function and chronic obstructive pulmonary disease identify new loci and potential druggable targets
title_fullStr Genome-wide association analyses for lung function and chronic obstructive pulmonary disease identify new loci and potential druggable targets
title_full_unstemmed Genome-wide association analyses for lung function and chronic obstructive pulmonary disease identify new loci and potential druggable targets
title_short Genome-wide association analyses for lung function and chronic obstructive pulmonary disease identify new loci and potential druggable targets
title_sort genome-wide association analyses for lung function and chronic obstructive pulmonary disease identify new loci and potential druggable targets
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5326681/
https://www.ncbi.nlm.nih.gov/pubmed/28166213
http://dx.doi.org/10.1038/ng.3787
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AT gislasonthorarinn genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT stefanssonkari genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT schurmannclaudia genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT nadkarnigirish genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT bottingererwinp genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT loosruthjf genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT waltersrobing genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT chenzhengming genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT millwoodionay genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT vaucherjulien genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT kurmiomp genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT liliming genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT hansellannal genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT brightlingchris genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT zegginieleftheria genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT chomichaelh genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT silvermanedwink genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT sayersian genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT trynkagosia genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT morrisandrewp genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT strachandavidp genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT hallianp genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets
AT tobinmartind genomewideassociationanalysesforlungfunctionandchronicobstructivepulmonarydiseaseidentifynewlociandpotentialdruggabletargets