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SVMRFE based approach for prediction of most discriminatory gene target for type II diabetes

Type II diabetes is a chronic condition that affects the way our body metabolizes sugar. The body's important source of fuel is now becoming a chronic disease all over the world. It is now very necessary to identify the new potential targets for the drugs which not only control the disease but...

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Detalles Bibliográficos
Autores principales: Kumar, Atul, Jeya Sundara Sharmila, D., Singh, Sachidanand
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5331150/
https://www.ncbi.nlm.nih.gov/pubmed/28275550
http://dx.doi.org/10.1016/j.gdata.2017.02.008
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author Kumar, Atul
Jeya Sundara Sharmila, D.
Singh, Sachidanand
author_facet Kumar, Atul
Jeya Sundara Sharmila, D.
Singh, Sachidanand
author_sort Kumar, Atul
collection PubMed
description Type II diabetes is a chronic condition that affects the way our body metabolizes sugar. The body's important source of fuel is now becoming a chronic disease all over the world. It is now very necessary to identify the new potential targets for the drugs which not only control the disease but also can treat it. Support vector machines are the classifier which has a potential to make a classification of the discriminatory genes and non-discriminatory genes. SVMRFE a modification of SVM ranks the genes based on their discriminatory power and eliminate the genes which are not involved in causing the disease. A gene regulatory network has been formed with the top ranked coding genes to identify their role in causing diabetes. To further validate the results pathway study was performed to identify the involvement of the coding genes in type II diabetes. The genes obtained from this study showed a significant involvement in causing the disease, which may be used as a potential drug target.
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spelling pubmed-53311502017-03-08 SVMRFE based approach for prediction of most discriminatory gene target for type II diabetes Kumar, Atul Jeya Sundara Sharmila, D. Singh, Sachidanand Genom Data Regular Article Type II diabetes is a chronic condition that affects the way our body metabolizes sugar. The body's important source of fuel is now becoming a chronic disease all over the world. It is now very necessary to identify the new potential targets for the drugs which not only control the disease but also can treat it. Support vector machines are the classifier which has a potential to make a classification of the discriminatory genes and non-discriminatory genes. SVMRFE a modification of SVM ranks the genes based on their discriminatory power and eliminate the genes which are not involved in causing the disease. A gene regulatory network has been formed with the top ranked coding genes to identify their role in causing diabetes. To further validate the results pathway study was performed to identify the involvement of the coding genes in type II diabetes. The genes obtained from this study showed a significant involvement in causing the disease, which may be used as a potential drug target. Elsevier 2017-02-17 /pmc/articles/PMC5331150/ /pubmed/28275550 http://dx.doi.org/10.1016/j.gdata.2017.02.008 Text en © 2017 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Regular Article
Kumar, Atul
Jeya Sundara Sharmila, D.
Singh, Sachidanand
SVMRFE based approach for prediction of most discriminatory gene target for type II diabetes
title SVMRFE based approach for prediction of most discriminatory gene target for type II diabetes
title_full SVMRFE based approach for prediction of most discriminatory gene target for type II diabetes
title_fullStr SVMRFE based approach for prediction of most discriminatory gene target for type II diabetes
title_full_unstemmed SVMRFE based approach for prediction of most discriminatory gene target for type II diabetes
title_short SVMRFE based approach for prediction of most discriminatory gene target for type II diabetes
title_sort svmrfe based approach for prediction of most discriminatory gene target for type ii diabetes
topic Regular Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5331150/
https://www.ncbi.nlm.nih.gov/pubmed/28275550
http://dx.doi.org/10.1016/j.gdata.2017.02.008
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