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The rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the Chinese Han population
OBJECTIVE: Previous genome-wide association studies (GWASs) have identified rs6817105—a single nucleotide polymorphism (SNP) on chromosome 4q25—to be associated with the risk of atrial fibrillation (AF) in a European-descent population. We recently demonstrated this association in a large cohort of...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Kare Publishing
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5331349/ https://www.ncbi.nlm.nih.gov/pubmed/27488752 http://dx.doi.org/10.5152/AnatolJCardiol.2015.6542 |
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author | Fang, Zhen Liu, Yaowu Ni, Buqing Chen, Xin-guang Zhao, Liyan Zhang, Fengxiang |
author_facet | Fang, Zhen Liu, Yaowu Ni, Buqing Chen, Xin-guang Zhao, Liyan Zhang, Fengxiang |
author_sort | Fang, Zhen |
collection | PubMed |
description | OBJECTIVE: Previous genome-wide association studies (GWASs) have identified rs6817105—a single nucleotide polymorphism (SNP) on chromosome 4q25—to be associated with the risk of atrial fibrillation (AF) in a European-descent population. We recently demonstrated this association in a large cohort of Japanese ancestry. Our present study was designed to determine this association in the Chinese Han population. METHODS: This case–control study included 597 AF cases and 996 AF-free controls, and rs6817105 SNPs were genotyped using the TaqMan allelic discrimination assay. Odds ratios (ORs) and 95% confidence intervals (95%CIs) were calculated in logistic regression models. RESULTS: The genotype distribution of rs6817105-CC was significantly more frequent in the AF patients than in the controls (p=3.24´10(-32)). In our study, logistic regression analysis showed a strong association between rs6817105 and the risk of AF (additive model: OR=2.22, 95%CI=1.89–2.61, p=2.33´10(-22); dominant model: OR=2.96, 95% CI: 2.16–4.07, p=2.03´10(-11); recessive model: OR=2.83, 95%CI=2.27–3.54, p=4.00´10(-20)). Stratification analyses showed a borderline statistical difference between subgroups of age for the association of rs6817105 with AF risk (p=0.049). However, further interactive analysis indicated no significant interaction between genotype of rs6817105 and age (p=0.178). CONCLUSION: Our finding suggested that SNP rs6817105 may be associated with a high significant risk of AF in the Chinese Han population, although more replicative studies of larger sample size are needed to confirm this finding. |
format | Online Article Text |
id | pubmed-5331349 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Kare Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-53313492017-06-28 The rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the Chinese Han population Fang, Zhen Liu, Yaowu Ni, Buqing Chen, Xin-guang Zhao, Liyan Zhang, Fengxiang Anatol J Cardiol Original Investigation OBJECTIVE: Previous genome-wide association studies (GWASs) have identified rs6817105—a single nucleotide polymorphism (SNP) on chromosome 4q25—to be associated with the risk of atrial fibrillation (AF) in a European-descent population. We recently demonstrated this association in a large cohort of Japanese ancestry. Our present study was designed to determine this association in the Chinese Han population. METHODS: This case–control study included 597 AF cases and 996 AF-free controls, and rs6817105 SNPs were genotyped using the TaqMan allelic discrimination assay. Odds ratios (ORs) and 95% confidence intervals (95%CIs) were calculated in logistic regression models. RESULTS: The genotype distribution of rs6817105-CC was significantly more frequent in the AF patients than in the controls (p=3.24´10(-32)). In our study, logistic regression analysis showed a strong association between rs6817105 and the risk of AF (additive model: OR=2.22, 95%CI=1.89–2.61, p=2.33´10(-22); dominant model: OR=2.96, 95% CI: 2.16–4.07, p=2.03´10(-11); recessive model: OR=2.83, 95%CI=2.27–3.54, p=4.00´10(-20)). Stratification analyses showed a borderline statistical difference between subgroups of age for the association of rs6817105 with AF risk (p=0.049). However, further interactive analysis indicated no significant interaction between genotype of rs6817105 and age (p=0.178). CONCLUSION: Our finding suggested that SNP rs6817105 may be associated with a high significant risk of AF in the Chinese Han population, although more replicative studies of larger sample size are needed to confirm this finding. Kare Publishing 2016-09 2015-11-25 /pmc/articles/PMC5331349/ /pubmed/27488752 http://dx.doi.org/10.5152/AnatolJCardiol.2015.6542 Text en Copyright © 2016 Turkish Society of Cardiology http://creativecommons.org/licenses/by-nc-sa/4.0 This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License |
spellingShingle | Original Investigation Fang, Zhen Liu, Yaowu Ni, Buqing Chen, Xin-guang Zhao, Liyan Zhang, Fengxiang The rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the Chinese Han population |
title | The rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the Chinese Han population |
title_full | The rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the Chinese Han population |
title_fullStr | The rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the Chinese Han population |
title_full_unstemmed | The rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the Chinese Han population |
title_short | The rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the Chinese Han population |
title_sort | rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the chinese han population |
topic | Original Investigation |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5331349/ https://www.ncbi.nlm.nih.gov/pubmed/27488752 http://dx.doi.org/10.5152/AnatolJCardiol.2015.6542 |
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