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The rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the Chinese Han population

OBJECTIVE: Previous genome-wide association studies (GWASs) have identified rs6817105—a single nucleotide polymorphism (SNP) on chromosome 4q25—to be associated with the risk of atrial fibrillation (AF) in a European-descent population. We recently demonstrated this association in a large cohort of...

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Autores principales: Fang, Zhen, Liu, Yaowu, Ni, Buqing, Chen, Xin-guang, Zhao, Liyan, Zhang, Fengxiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Kare Publishing 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5331349/
https://www.ncbi.nlm.nih.gov/pubmed/27488752
http://dx.doi.org/10.5152/AnatolJCardiol.2015.6542
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author Fang, Zhen
Liu, Yaowu
Ni, Buqing
Chen, Xin-guang
Zhao, Liyan
Zhang, Fengxiang
author_facet Fang, Zhen
Liu, Yaowu
Ni, Buqing
Chen, Xin-guang
Zhao, Liyan
Zhang, Fengxiang
author_sort Fang, Zhen
collection PubMed
description OBJECTIVE: Previous genome-wide association studies (GWASs) have identified rs6817105—a single nucleotide polymorphism (SNP) on chromosome 4q25—to be associated with the risk of atrial fibrillation (AF) in a European-descent population. We recently demonstrated this association in a large cohort of Japanese ancestry. Our present study was designed to determine this association in the Chinese Han population. METHODS: This case–control study included 597 AF cases and 996 AF-free controls, and rs6817105 SNPs were genotyped using the TaqMan allelic discrimination assay. Odds ratios (ORs) and 95% confidence intervals (95%CIs) were calculated in logistic regression models. RESULTS: The genotype distribution of rs6817105-CC was significantly more frequent in the AF patients than in the controls (p=3.24´10(-32)). In our study, logistic regression analysis showed a strong association between rs6817105 and the risk of AF (additive model: OR=2.22, 95%CI=1.89–2.61, p=2.33´10(-22); dominant model: OR=2.96, 95% CI: 2.16–4.07, p=2.03´10(-11); recessive model: OR=2.83, 95%CI=2.27–3.54, p=4.00´10(-20)). Stratification analyses showed a borderline statistical difference between subgroups of age for the association of rs6817105 with AF risk (p=0.049). However, further interactive analysis indicated no significant interaction between genotype of rs6817105 and age (p=0.178). CONCLUSION: Our finding suggested that SNP rs6817105 may be associated with a high significant risk of AF in the Chinese Han population, although more replicative studies of larger sample size are needed to confirm this finding.
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spelling pubmed-53313492017-06-28 The rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the Chinese Han population Fang, Zhen Liu, Yaowu Ni, Buqing Chen, Xin-guang Zhao, Liyan Zhang, Fengxiang Anatol J Cardiol Original Investigation OBJECTIVE: Previous genome-wide association studies (GWASs) have identified rs6817105—a single nucleotide polymorphism (SNP) on chromosome 4q25—to be associated with the risk of atrial fibrillation (AF) in a European-descent population. We recently demonstrated this association in a large cohort of Japanese ancestry. Our present study was designed to determine this association in the Chinese Han population. METHODS: This case–control study included 597 AF cases and 996 AF-free controls, and rs6817105 SNPs were genotyped using the TaqMan allelic discrimination assay. Odds ratios (ORs) and 95% confidence intervals (95%CIs) were calculated in logistic regression models. RESULTS: The genotype distribution of rs6817105-CC was significantly more frequent in the AF patients than in the controls (p=3.24´10(-32)). In our study, logistic regression analysis showed a strong association between rs6817105 and the risk of AF (additive model: OR=2.22, 95%CI=1.89–2.61, p=2.33´10(-22); dominant model: OR=2.96, 95% CI: 2.16–4.07, p=2.03´10(-11); recessive model: OR=2.83, 95%CI=2.27–3.54, p=4.00´10(-20)). Stratification analyses showed a borderline statistical difference between subgroups of age for the association of rs6817105 with AF risk (p=0.049). However, further interactive analysis indicated no significant interaction between genotype of rs6817105 and age (p=0.178). CONCLUSION: Our finding suggested that SNP rs6817105 may be associated with a high significant risk of AF in the Chinese Han population, although more replicative studies of larger sample size are needed to confirm this finding. Kare Publishing 2016-09 2015-11-25 /pmc/articles/PMC5331349/ /pubmed/27488752 http://dx.doi.org/10.5152/AnatolJCardiol.2015.6542 Text en Copyright © 2016 Turkish Society of Cardiology http://creativecommons.org/licenses/by-nc-sa/4.0 This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License
spellingShingle Original Investigation
Fang, Zhen
Liu, Yaowu
Ni, Buqing
Chen, Xin-guang
Zhao, Liyan
Zhang, Fengxiang
The rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the Chinese Han population
title The rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the Chinese Han population
title_full The rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the Chinese Han population
title_fullStr The rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the Chinese Han population
title_full_unstemmed The rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the Chinese Han population
title_short The rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the Chinese Han population
title_sort rs6817105 polymorphism on chromosome 4q25 is associated with the risk of atrial fibrillation in the chinese han population
topic Original Investigation
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5331349/
https://www.ncbi.nlm.nih.gov/pubmed/27488752
http://dx.doi.org/10.5152/AnatolJCardiol.2015.6542
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