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Raw diffraction data preservation and reuse: overview, update on practicalities and metadata requirements
A topical review is presented of the rapidly developing interest in and storage options for the preservation and reuse of raw data within the scientific domain of the IUCr and its Commissions, each of which operates within a great diversity of instrumentation. A résumé is included of the case for ra...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5331468/ https://www.ncbi.nlm.nih.gov/pubmed/28250944 http://dx.doi.org/10.1107/S2052252516018315 |
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author | Kroon-Batenburg, Loes M. J. Helliwell, John R. McMahon, Brian Terwilliger, Thomas C. |
author_facet | Kroon-Batenburg, Loes M. J. Helliwell, John R. McMahon, Brian Terwilliger, Thomas C. |
author_sort | Kroon-Batenburg, Loes M. J. |
collection | PubMed |
description | A topical review is presented of the rapidly developing interest in and storage options for the preservation and reuse of raw data within the scientific domain of the IUCr and its Commissions, each of which operates within a great diversity of instrumentation. A résumé is included of the case for raw diffraction data deposition. An overall context is set by highlighting the initiatives of science policy makers towards an ‘Open Science’ model within which crystallographers will increasingly work in the future; this will bring new funding opportunities but also new codes of procedure within open science frameworks. Skills education and training for crystallographers will need to be expanded. Overall, there are now the means and the organization for the preservation of raw crystallographic diffraction data via different types of archive, such as at universities, discipline-specific repositories (Integrated Resource for Reproducibility in Macromolecular Crystallography, Structural Biology Data Grid), general public data repositories (Zenodo, ResearchGate) and centralized neutron and X-ray facilities. Formulation of improved metadata descriptors for the raw data types of each of the IUCr Commissions is in progress; some detailed examples are provided. A number of specific case studies are presented, including an example research thread that provides complete open access to raw data. |
format | Online Article Text |
id | pubmed-5331468 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-53314682017-03-01 Raw diffraction data preservation and reuse: overview, update on practicalities and metadata requirements Kroon-Batenburg, Loes M. J. Helliwell, John R. McMahon, Brian Terwilliger, Thomas C. IUCrJ Topical Reviews A topical review is presented of the rapidly developing interest in and storage options for the preservation and reuse of raw data within the scientific domain of the IUCr and its Commissions, each of which operates within a great diversity of instrumentation. A résumé is included of the case for raw diffraction data deposition. An overall context is set by highlighting the initiatives of science policy makers towards an ‘Open Science’ model within which crystallographers will increasingly work in the future; this will bring new funding opportunities but also new codes of procedure within open science frameworks. Skills education and training for crystallographers will need to be expanded. Overall, there are now the means and the organization for the preservation of raw crystallographic diffraction data via different types of archive, such as at universities, discipline-specific repositories (Integrated Resource for Reproducibility in Macromolecular Crystallography, Structural Biology Data Grid), general public data repositories (Zenodo, ResearchGate) and centralized neutron and X-ray facilities. Formulation of improved metadata descriptors for the raw data types of each of the IUCr Commissions is in progress; some detailed examples are provided. A number of specific case studies are presented, including an example research thread that provides complete open access to raw data. International Union of Crystallography 2017-01-01 /pmc/articles/PMC5331468/ /pubmed/28250944 http://dx.doi.org/10.1107/S2052252516018315 Text en © Loes M.J. Kroon-Batenburg et al. 2017 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/2.0/uk/ |
spellingShingle | Topical Reviews Kroon-Batenburg, Loes M. J. Helliwell, John R. McMahon, Brian Terwilliger, Thomas C. Raw diffraction data preservation and reuse: overview, update on practicalities and metadata requirements |
title | Raw diffraction data preservation and reuse: overview, update on practicalities and metadata requirements |
title_full | Raw diffraction data preservation and reuse: overview, update on practicalities and metadata requirements |
title_fullStr | Raw diffraction data preservation and reuse: overview, update on practicalities and metadata requirements |
title_full_unstemmed | Raw diffraction data preservation and reuse: overview, update on practicalities and metadata requirements |
title_short | Raw diffraction data preservation and reuse: overview, update on practicalities and metadata requirements |
title_sort | raw diffraction data preservation and reuse: overview, update on practicalities and metadata requirements |
topic | Topical Reviews |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5331468/ https://www.ncbi.nlm.nih.gov/pubmed/28250944 http://dx.doi.org/10.1107/S2052252516018315 |
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