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Prediction of Pig Trade Movements in Different European Production Systems Using Exponential Random Graph Models

In most European countries, data regarding movements of live animals are routinely collected and can greatly aid predictive epidemic modeling. However, the use of complete movements’ dataset to conduct policy-relevant predictions has been so far limited by the massive amount of data that have to be...

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Autores principales: Relun, Anne, Grosbois, Vladimir, Alexandrov, Tsviatko, Sánchez-Vizcaíno, Jose M., Waret-Szkuta, Agnes, Molia, Sophie, Etter, Eric Marcel Charles, Martínez-López, Beatriz
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5334338/
https://www.ncbi.nlm.nih.gov/pubmed/28316972
http://dx.doi.org/10.3389/fvets.2017.00027
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author Relun, Anne
Grosbois, Vladimir
Alexandrov, Tsviatko
Sánchez-Vizcaíno, Jose M.
Waret-Szkuta, Agnes
Molia, Sophie
Etter, Eric Marcel Charles
Martínez-López, Beatriz
author_facet Relun, Anne
Grosbois, Vladimir
Alexandrov, Tsviatko
Sánchez-Vizcaíno, Jose M.
Waret-Szkuta, Agnes
Molia, Sophie
Etter, Eric Marcel Charles
Martínez-López, Beatriz
author_sort Relun, Anne
collection PubMed
description In most European countries, data regarding movements of live animals are routinely collected and can greatly aid predictive epidemic modeling. However, the use of complete movements’ dataset to conduct policy-relevant predictions has been so far limited by the massive amount of data that have to be processed (e.g., in intensive commercial systems) or the restricted availability of timely and updated records on animal movements (e.g., in areas where small-scale or extensive production is predominant). The aim of this study was to use exponential random graph models (ERGMs) to reproduce, understand, and predict pig trade networks in different European production systems. Three trade networks were built by aggregating movements of pig batches among premises (farms and trade operators) over 2011 in Bulgaria, Extremadura (Spain), and Côtes-d’Armor (France), where small-scale, extensive, and intensive pig production are predominant, respectively. Three ERGMs were fitted to each network with various demographic and geographic attributes of the nodes as well as six internal network configurations. Several statistical and graphical diagnostic methods were applied to assess the goodness of fit of the models. For all systems, both exogenous (attribute-based) and endogenous (network-based) processes appeared to govern the structure of pig trade network, and neither alone were capable of capturing all aspects of the network structure. Geographic mixing patterns strongly structured pig trade organization in the small-scale production system, whereas belonging to the same company or keeping pigs in the same housing system appeared to be key drivers of pig trade, in intensive and extensive production systems, respectively. Heterogeneous mixing between types of production also explained a part of network structure, whichever production system considered. Limited information is thus needed to capture most of the global structure of pig trade networks. Such findings will be useful to simplify trade networks analysis and better inform European policy makers on risk-based and more cost-effective prevention and control against swine diseases such as African swine fever, classical swine fever, or porcine reproductive and respiratory syndrome.
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spelling pubmed-53343382017-03-17 Prediction of Pig Trade Movements in Different European Production Systems Using Exponential Random Graph Models Relun, Anne Grosbois, Vladimir Alexandrov, Tsviatko Sánchez-Vizcaíno, Jose M. Waret-Szkuta, Agnes Molia, Sophie Etter, Eric Marcel Charles Martínez-López, Beatriz Front Vet Sci Veterinary Science In most European countries, data regarding movements of live animals are routinely collected and can greatly aid predictive epidemic modeling. However, the use of complete movements’ dataset to conduct policy-relevant predictions has been so far limited by the massive amount of data that have to be processed (e.g., in intensive commercial systems) or the restricted availability of timely and updated records on animal movements (e.g., in areas where small-scale or extensive production is predominant). The aim of this study was to use exponential random graph models (ERGMs) to reproduce, understand, and predict pig trade networks in different European production systems. Three trade networks were built by aggregating movements of pig batches among premises (farms and trade operators) over 2011 in Bulgaria, Extremadura (Spain), and Côtes-d’Armor (France), where small-scale, extensive, and intensive pig production are predominant, respectively. Three ERGMs were fitted to each network with various demographic and geographic attributes of the nodes as well as six internal network configurations. Several statistical and graphical diagnostic methods were applied to assess the goodness of fit of the models. For all systems, both exogenous (attribute-based) and endogenous (network-based) processes appeared to govern the structure of pig trade network, and neither alone were capable of capturing all aspects of the network structure. Geographic mixing patterns strongly structured pig trade organization in the small-scale production system, whereas belonging to the same company or keeping pigs in the same housing system appeared to be key drivers of pig trade, in intensive and extensive production systems, respectively. Heterogeneous mixing between types of production also explained a part of network structure, whichever production system considered. Limited information is thus needed to capture most of the global structure of pig trade networks. Such findings will be useful to simplify trade networks analysis and better inform European policy makers on risk-based and more cost-effective prevention and control against swine diseases such as African swine fever, classical swine fever, or porcine reproductive and respiratory syndrome. Frontiers Media S.A. 2017-03-03 /pmc/articles/PMC5334338/ /pubmed/28316972 http://dx.doi.org/10.3389/fvets.2017.00027 Text en Copyright © 2017 Relun, Grosbois, Alexandrov, Sánchez-Vizcaíno, Waret-Szkuta, Molia, Etter and Martínez-López. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Veterinary Science
Relun, Anne
Grosbois, Vladimir
Alexandrov, Tsviatko
Sánchez-Vizcaíno, Jose M.
Waret-Szkuta, Agnes
Molia, Sophie
Etter, Eric Marcel Charles
Martínez-López, Beatriz
Prediction of Pig Trade Movements in Different European Production Systems Using Exponential Random Graph Models
title Prediction of Pig Trade Movements in Different European Production Systems Using Exponential Random Graph Models
title_full Prediction of Pig Trade Movements in Different European Production Systems Using Exponential Random Graph Models
title_fullStr Prediction of Pig Trade Movements in Different European Production Systems Using Exponential Random Graph Models
title_full_unstemmed Prediction of Pig Trade Movements in Different European Production Systems Using Exponential Random Graph Models
title_short Prediction of Pig Trade Movements in Different European Production Systems Using Exponential Random Graph Models
title_sort prediction of pig trade movements in different european production systems using exponential random graph models
topic Veterinary Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5334338/
https://www.ncbi.nlm.nih.gov/pubmed/28316972
http://dx.doi.org/10.3389/fvets.2017.00027
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