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Data integration aids understanding of butterfly–host plant networks
Although host-plant selection is a central topic in ecology, its general underpinnings are poorly understood. Here, we performed a case study focusing on the publicly available data on Japanese butterflies. A combined statistical analysis of plant–herbivore relationships and taxonomy revealed that s...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5338290/ https://www.ncbi.nlm.nih.gov/pubmed/28262809 http://dx.doi.org/10.1038/srep43368 |
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author | Muto-Fujita, Ai Takemoto, Kazuhiro Kanaya, Shigehiko Nakazato, Takeru Tokimatsu, Toshiaki Matsumoto, Natsushi Kono, Mayo Chubachi, Yuko Ozaki, Katsuhisa Kotera, Masaaki |
author_facet | Muto-Fujita, Ai Takemoto, Kazuhiro Kanaya, Shigehiko Nakazato, Takeru Tokimatsu, Toshiaki Matsumoto, Natsushi Kono, Mayo Chubachi, Yuko Ozaki, Katsuhisa Kotera, Masaaki |
author_sort | Muto-Fujita, Ai |
collection | PubMed |
description | Although host-plant selection is a central topic in ecology, its general underpinnings are poorly understood. Here, we performed a case study focusing on the publicly available data on Japanese butterflies. A combined statistical analysis of plant–herbivore relationships and taxonomy revealed that some butterfly subfamilies in different families feed on the same plant families, and the occurrence of this phenomenon more than just by chance, thus indicating the independent acquisition of adaptive phenotypes to the same hosts. We consequently integrated plant–herbivore and plant–compound relationship data and conducted a statistical analysis to identify compounds unique to host plants of specific butterfly families. Some of the identified plant compounds are known to attract certain butterfly groups while repelling others. The additional incorporation of insect–compound relationship data revealed potential metabolic processes that are related to host plant selection. Our results demonstrate that data integration enables the computational detection of compounds putatively involved in particular interspecies interactions and that further data enrichment and integration of genomic and transcriptomic data facilitates the unveiling of the molecular mechanisms involved in host plant selection. |
format | Online Article Text |
id | pubmed-5338290 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-53382902017-03-08 Data integration aids understanding of butterfly–host plant networks Muto-Fujita, Ai Takemoto, Kazuhiro Kanaya, Shigehiko Nakazato, Takeru Tokimatsu, Toshiaki Matsumoto, Natsushi Kono, Mayo Chubachi, Yuko Ozaki, Katsuhisa Kotera, Masaaki Sci Rep Article Although host-plant selection is a central topic in ecology, its general underpinnings are poorly understood. Here, we performed a case study focusing on the publicly available data on Japanese butterflies. A combined statistical analysis of plant–herbivore relationships and taxonomy revealed that some butterfly subfamilies in different families feed on the same plant families, and the occurrence of this phenomenon more than just by chance, thus indicating the independent acquisition of adaptive phenotypes to the same hosts. We consequently integrated plant–herbivore and plant–compound relationship data and conducted a statistical analysis to identify compounds unique to host plants of specific butterfly families. Some of the identified plant compounds are known to attract certain butterfly groups while repelling others. The additional incorporation of insect–compound relationship data revealed potential metabolic processes that are related to host plant selection. Our results demonstrate that data integration enables the computational detection of compounds putatively involved in particular interspecies interactions and that further data enrichment and integration of genomic and transcriptomic data facilitates the unveiling of the molecular mechanisms involved in host plant selection. Nature Publishing Group 2017-03-06 /pmc/articles/PMC5338290/ /pubmed/28262809 http://dx.doi.org/10.1038/srep43368 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Muto-Fujita, Ai Takemoto, Kazuhiro Kanaya, Shigehiko Nakazato, Takeru Tokimatsu, Toshiaki Matsumoto, Natsushi Kono, Mayo Chubachi, Yuko Ozaki, Katsuhisa Kotera, Masaaki Data integration aids understanding of butterfly–host plant networks |
title | Data integration aids understanding of butterfly–host plant networks |
title_full | Data integration aids understanding of butterfly–host plant networks |
title_fullStr | Data integration aids understanding of butterfly–host plant networks |
title_full_unstemmed | Data integration aids understanding of butterfly–host plant networks |
title_short | Data integration aids understanding of butterfly–host plant networks |
title_sort | data integration aids understanding of butterfly–host plant networks |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5338290/ https://www.ncbi.nlm.nih.gov/pubmed/28262809 http://dx.doi.org/10.1038/srep43368 |
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