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Electromagnetic Field Seems to Not Influence Transcription via CTCT Motif in Three Plant Promoters
It was proposed that magnetic fields (MFs) can influence gene transcription via CTCT motif located in human HSP70 promoter. To check the universality of this mechanism, we estimated the potential role of this motif on plant gene transcription in response to MFs using both bioinformatics and experime...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5339303/ https://www.ncbi.nlm.nih.gov/pubmed/28326086 http://dx.doi.org/10.3389/fpls.2017.00178 |
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author | Sztafrowski, Dariusz Aksamit-Stachurska, Anna Kostyn, Kamil Mackiewicz, Paweł Łukaszewicz, Marcin |
author_facet | Sztafrowski, Dariusz Aksamit-Stachurska, Anna Kostyn, Kamil Mackiewicz, Paweł Łukaszewicz, Marcin |
author_sort | Sztafrowski, Dariusz |
collection | PubMed |
description | It was proposed that magnetic fields (MFs) can influence gene transcription via CTCT motif located in human HSP70 promoter. To check the universality of this mechanism, we estimated the potential role of this motif on plant gene transcription in response to MFs using both bioinformatics and experimental studies. We searched potential promoter sequences (1000 bp upstream) in the potato Solanum tuberosum and thale cress Arabidopsis thaliana genomes for the CTCT sequence. The motif was found, on average, 3.6 and 4.3 times per promoter (148,487 and 134,361 motifs in total) in these two species, respectively; however, the CTCT sequences were not randomly distributed in the promoter regions but were preferentially located near the transcription initiation site and were closely packed. The closer these CTCT sequences to the transcription initiation site, the smaller distance between them in both plants. One can assume that genes with many CTCT motifs in their promoter regions can be potentially regulated by MFs. To check this assumption, we tested the influence of MFs on gene expression in a transgenic potato with three promoters (16R, 20R, and 5UGT) containing from 3 to 12 CTCT sequences and starting expression of β-glucuronidase as a reported gene. The potatoes were exposed to a 50 Hz 60–70 A/m MF for 30 min and the reporter gene activity was measured for up to 24 h. Although other factors induced the reporter gene activity, the MF did not. It implies the CTCT motif does not mediate in response to MF in the tested plant promoters. |
format | Online Article Text |
id | pubmed-5339303 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-53393032017-03-21 Electromagnetic Field Seems to Not Influence Transcription via CTCT Motif in Three Plant Promoters Sztafrowski, Dariusz Aksamit-Stachurska, Anna Kostyn, Kamil Mackiewicz, Paweł Łukaszewicz, Marcin Front Plant Sci Plant Science It was proposed that magnetic fields (MFs) can influence gene transcription via CTCT motif located in human HSP70 promoter. To check the universality of this mechanism, we estimated the potential role of this motif on plant gene transcription in response to MFs using both bioinformatics and experimental studies. We searched potential promoter sequences (1000 bp upstream) in the potato Solanum tuberosum and thale cress Arabidopsis thaliana genomes for the CTCT sequence. The motif was found, on average, 3.6 and 4.3 times per promoter (148,487 and 134,361 motifs in total) in these two species, respectively; however, the CTCT sequences were not randomly distributed in the promoter regions but were preferentially located near the transcription initiation site and were closely packed. The closer these CTCT sequences to the transcription initiation site, the smaller distance between them in both plants. One can assume that genes with many CTCT motifs in their promoter regions can be potentially regulated by MFs. To check this assumption, we tested the influence of MFs on gene expression in a transgenic potato with three promoters (16R, 20R, and 5UGT) containing from 3 to 12 CTCT sequences and starting expression of β-glucuronidase as a reported gene. The potatoes were exposed to a 50 Hz 60–70 A/m MF for 30 min and the reporter gene activity was measured for up to 24 h. Although other factors induced the reporter gene activity, the MF did not. It implies the CTCT motif does not mediate in response to MF in the tested plant promoters. Frontiers Media S.A. 2017-03-07 /pmc/articles/PMC5339303/ /pubmed/28326086 http://dx.doi.org/10.3389/fpls.2017.00178 Text en Copyright © 2017 Sztafrowski, Aksamit-Stachurska, Kostyn, Mackiewicz and Łukaszewicz. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Sztafrowski, Dariusz Aksamit-Stachurska, Anna Kostyn, Kamil Mackiewicz, Paweł Łukaszewicz, Marcin Electromagnetic Field Seems to Not Influence Transcription via CTCT Motif in Three Plant Promoters |
title | Electromagnetic Field Seems to Not Influence Transcription via CTCT Motif in Three Plant Promoters |
title_full | Electromagnetic Field Seems to Not Influence Transcription via CTCT Motif in Three Plant Promoters |
title_fullStr | Electromagnetic Field Seems to Not Influence Transcription via CTCT Motif in Three Plant Promoters |
title_full_unstemmed | Electromagnetic Field Seems to Not Influence Transcription via CTCT Motif in Three Plant Promoters |
title_short | Electromagnetic Field Seems to Not Influence Transcription via CTCT Motif in Three Plant Promoters |
title_sort | electromagnetic field seems to not influence transcription via ctct motif in three plant promoters |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5339303/ https://www.ncbi.nlm.nih.gov/pubmed/28326086 http://dx.doi.org/10.3389/fpls.2017.00178 |
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