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The generalized Simpson’s entropy is a measure of biodiversity
Modern measures of diversity satisfy reasonable axioms, are parameterized to produce diversity profiles, can be expressed as an effective number of species to simplify their interpretation, and come with estimators that allow one to apply them to real-world data. We introduce the generalized Simpson...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5340404/ https://www.ncbi.nlm.nih.gov/pubmed/28267765 http://dx.doi.org/10.1371/journal.pone.0173305 |
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author | Grabchak, Michael Marcon, Eric Lang, Gabriel Zhang, Zhiyi |
author_facet | Grabchak, Michael Marcon, Eric Lang, Gabriel Zhang, Zhiyi |
author_sort | Grabchak, Michael |
collection | PubMed |
description | Modern measures of diversity satisfy reasonable axioms, are parameterized to produce diversity profiles, can be expressed as an effective number of species to simplify their interpretation, and come with estimators that allow one to apply them to real-world data. We introduce the generalized Simpson’s entropy as a measure of diversity and investigate its properties. We show that it has many useful features and can be used as a measure of biodiversity. Moreover, unlike most commonly used diversity indices, it has unbiased estimators, which allow for sound estimation of the diversity of poorly sampled, rich communities. |
format | Online Article Text |
id | pubmed-5340404 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-53404042017-03-29 The generalized Simpson’s entropy is a measure of biodiversity Grabchak, Michael Marcon, Eric Lang, Gabriel Zhang, Zhiyi PLoS One Research Article Modern measures of diversity satisfy reasonable axioms, are parameterized to produce diversity profiles, can be expressed as an effective number of species to simplify their interpretation, and come with estimators that allow one to apply them to real-world data. We introduce the generalized Simpson’s entropy as a measure of diversity and investigate its properties. We show that it has many useful features and can be used as a measure of biodiversity. Moreover, unlike most commonly used diversity indices, it has unbiased estimators, which allow for sound estimation of the diversity of poorly sampled, rich communities. Public Library of Science 2017-03-07 /pmc/articles/PMC5340404/ /pubmed/28267765 http://dx.doi.org/10.1371/journal.pone.0173305 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication. |
spellingShingle | Research Article Grabchak, Michael Marcon, Eric Lang, Gabriel Zhang, Zhiyi The generalized Simpson’s entropy is a measure of biodiversity |
title | The generalized Simpson’s entropy is a measure of biodiversity |
title_full | The generalized Simpson’s entropy is a measure of biodiversity |
title_fullStr | The generalized Simpson’s entropy is a measure of biodiversity |
title_full_unstemmed | The generalized Simpson’s entropy is a measure of biodiversity |
title_short | The generalized Simpson’s entropy is a measure of biodiversity |
title_sort | generalized simpson’s entropy is a measure of biodiversity |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5340404/ https://www.ncbi.nlm.nih.gov/pubmed/28267765 http://dx.doi.org/10.1371/journal.pone.0173305 |
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