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Engineered LINE-1 retrotransposition in nondividing human neurons

Half the human genome is made of transposable elements (TEs), whose ongoing activity continues to impact our genome. LINE-1 (or L1) is an autonomous non-LTR retrotransposon in the human genome, comprising 17% of its genomic mass and containing an average of 80–100 active L1s per average genome that...

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Autores principales: Macia, Angela, Widmann, Thomas J., Heras, Sara R., Ayllon, Veronica, Sanchez, Laura, Benkaddour-Boumzaouad, Meriem, Muñoz-Lopez, Martin, Rubio, Alejandro, Amador-Cubero, Suyapa, Blanco-Jimenez, Eva, Garcia-Castro, Javier, Menendez, Pablo, Ng, Philip, Muotri, Alysson R., Goodier, John L., Garcia-Perez, Jose L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory Press 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5340962/
https://www.ncbi.nlm.nih.gov/pubmed/27965292
http://dx.doi.org/10.1101/gr.206805.116
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author Macia, Angela
Widmann, Thomas J.
Heras, Sara R.
Ayllon, Veronica
Sanchez, Laura
Benkaddour-Boumzaouad, Meriem
Muñoz-Lopez, Martin
Rubio, Alejandro
Amador-Cubero, Suyapa
Blanco-Jimenez, Eva
Garcia-Castro, Javier
Menendez, Pablo
Ng, Philip
Muotri, Alysson R.
Goodier, John L.
Garcia-Perez, Jose L.
author_facet Macia, Angela
Widmann, Thomas J.
Heras, Sara R.
Ayllon, Veronica
Sanchez, Laura
Benkaddour-Boumzaouad, Meriem
Muñoz-Lopez, Martin
Rubio, Alejandro
Amador-Cubero, Suyapa
Blanco-Jimenez, Eva
Garcia-Castro, Javier
Menendez, Pablo
Ng, Philip
Muotri, Alysson R.
Goodier, John L.
Garcia-Perez, Jose L.
author_sort Macia, Angela
collection PubMed
description Half the human genome is made of transposable elements (TEs), whose ongoing activity continues to impact our genome. LINE-1 (or L1) is an autonomous non-LTR retrotransposon in the human genome, comprising 17% of its genomic mass and containing an average of 80–100 active L1s per average genome that provide a source of inter-individual variation. New LINE-1 insertions are thought to accumulate mostly during human embryogenesis. Surprisingly, the activity of L1s can further impact the somatic human brain genome. However, it is currently unknown whether L1 can retrotranspose in other somatic healthy tissues or if L1 mobilization is restricted to neuronal precursor cells (NPCs) in the human brain. Here, we took advantage of an engineered L1 retrotransposition assay to analyze L1 mobilization rates in human mesenchymal (MSCs) and hematopoietic (HSCs) somatic stem cells. Notably, we have observed that L1 expression and engineered retrotransposition is much lower in both MSCs and HSCs when compared to NPCs. Remarkably, we have further demonstrated for the first time that engineered L1s can retrotranspose efficiently in mature nondividing neuronal cells. Thus, these findings suggest that the degree of somatic mosaicism and the impact of L1 retrotransposition in the human brain is likely much higher than previously thought.
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spelling pubmed-53409622017-09-01 Engineered LINE-1 retrotransposition in nondividing human neurons Macia, Angela Widmann, Thomas J. Heras, Sara R. Ayllon, Veronica Sanchez, Laura Benkaddour-Boumzaouad, Meriem Muñoz-Lopez, Martin Rubio, Alejandro Amador-Cubero, Suyapa Blanco-Jimenez, Eva Garcia-Castro, Javier Menendez, Pablo Ng, Philip Muotri, Alysson R. Goodier, John L. Garcia-Perez, Jose L. Genome Res Research Half the human genome is made of transposable elements (TEs), whose ongoing activity continues to impact our genome. LINE-1 (or L1) is an autonomous non-LTR retrotransposon in the human genome, comprising 17% of its genomic mass and containing an average of 80–100 active L1s per average genome that provide a source of inter-individual variation. New LINE-1 insertions are thought to accumulate mostly during human embryogenesis. Surprisingly, the activity of L1s can further impact the somatic human brain genome. However, it is currently unknown whether L1 can retrotranspose in other somatic healthy tissues or if L1 mobilization is restricted to neuronal precursor cells (NPCs) in the human brain. Here, we took advantage of an engineered L1 retrotransposition assay to analyze L1 mobilization rates in human mesenchymal (MSCs) and hematopoietic (HSCs) somatic stem cells. Notably, we have observed that L1 expression and engineered retrotransposition is much lower in both MSCs and HSCs when compared to NPCs. Remarkably, we have further demonstrated for the first time that engineered L1s can retrotranspose efficiently in mature nondividing neuronal cells. Thus, these findings suggest that the degree of somatic mosaicism and the impact of L1 retrotransposition in the human brain is likely much higher than previously thought. Cold Spring Harbor Laboratory Press 2017-03 /pmc/articles/PMC5340962/ /pubmed/27965292 http://dx.doi.org/10.1101/gr.206805.116 Text en © 2017 Macia et al.; Published by Cold Spring Harbor Laboratory Press http://creativecommons.org/licenses/by-nc/4.0/ This article is distributed exclusively by Cold Spring Harbor Laboratory Press for the first six months after the full-issue publication date (see http://genome.cshlp.org/site/misc/terms.xhtml). After six months, it is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/.
spellingShingle Research
Macia, Angela
Widmann, Thomas J.
Heras, Sara R.
Ayllon, Veronica
Sanchez, Laura
Benkaddour-Boumzaouad, Meriem
Muñoz-Lopez, Martin
Rubio, Alejandro
Amador-Cubero, Suyapa
Blanco-Jimenez, Eva
Garcia-Castro, Javier
Menendez, Pablo
Ng, Philip
Muotri, Alysson R.
Goodier, John L.
Garcia-Perez, Jose L.
Engineered LINE-1 retrotransposition in nondividing human neurons
title Engineered LINE-1 retrotransposition in nondividing human neurons
title_full Engineered LINE-1 retrotransposition in nondividing human neurons
title_fullStr Engineered LINE-1 retrotransposition in nondividing human neurons
title_full_unstemmed Engineered LINE-1 retrotransposition in nondividing human neurons
title_short Engineered LINE-1 retrotransposition in nondividing human neurons
title_sort engineered line-1 retrotransposition in nondividing human neurons
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5340962/
https://www.ncbi.nlm.nih.gov/pubmed/27965292
http://dx.doi.org/10.1101/gr.206805.116
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