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Engineered LINE-1 retrotransposition in nondividing human neurons
Half the human genome is made of transposable elements (TEs), whose ongoing activity continues to impact our genome. LINE-1 (or L1) is an autonomous non-LTR retrotransposon in the human genome, comprising 17% of its genomic mass and containing an average of 80–100 active L1s per average genome that...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory Press
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5340962/ https://www.ncbi.nlm.nih.gov/pubmed/27965292 http://dx.doi.org/10.1101/gr.206805.116 |
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author | Macia, Angela Widmann, Thomas J. Heras, Sara R. Ayllon, Veronica Sanchez, Laura Benkaddour-Boumzaouad, Meriem Muñoz-Lopez, Martin Rubio, Alejandro Amador-Cubero, Suyapa Blanco-Jimenez, Eva Garcia-Castro, Javier Menendez, Pablo Ng, Philip Muotri, Alysson R. Goodier, John L. Garcia-Perez, Jose L. |
author_facet | Macia, Angela Widmann, Thomas J. Heras, Sara R. Ayllon, Veronica Sanchez, Laura Benkaddour-Boumzaouad, Meriem Muñoz-Lopez, Martin Rubio, Alejandro Amador-Cubero, Suyapa Blanco-Jimenez, Eva Garcia-Castro, Javier Menendez, Pablo Ng, Philip Muotri, Alysson R. Goodier, John L. Garcia-Perez, Jose L. |
author_sort | Macia, Angela |
collection | PubMed |
description | Half the human genome is made of transposable elements (TEs), whose ongoing activity continues to impact our genome. LINE-1 (or L1) is an autonomous non-LTR retrotransposon in the human genome, comprising 17% of its genomic mass and containing an average of 80–100 active L1s per average genome that provide a source of inter-individual variation. New LINE-1 insertions are thought to accumulate mostly during human embryogenesis. Surprisingly, the activity of L1s can further impact the somatic human brain genome. However, it is currently unknown whether L1 can retrotranspose in other somatic healthy tissues or if L1 mobilization is restricted to neuronal precursor cells (NPCs) in the human brain. Here, we took advantage of an engineered L1 retrotransposition assay to analyze L1 mobilization rates in human mesenchymal (MSCs) and hematopoietic (HSCs) somatic stem cells. Notably, we have observed that L1 expression and engineered retrotransposition is much lower in both MSCs and HSCs when compared to NPCs. Remarkably, we have further demonstrated for the first time that engineered L1s can retrotranspose efficiently in mature nondividing neuronal cells. Thus, these findings suggest that the degree of somatic mosaicism and the impact of L1 retrotransposition in the human brain is likely much higher than previously thought. |
format | Online Article Text |
id | pubmed-5340962 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Cold Spring Harbor Laboratory Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-53409622017-09-01 Engineered LINE-1 retrotransposition in nondividing human neurons Macia, Angela Widmann, Thomas J. Heras, Sara R. Ayllon, Veronica Sanchez, Laura Benkaddour-Boumzaouad, Meriem Muñoz-Lopez, Martin Rubio, Alejandro Amador-Cubero, Suyapa Blanco-Jimenez, Eva Garcia-Castro, Javier Menendez, Pablo Ng, Philip Muotri, Alysson R. Goodier, John L. Garcia-Perez, Jose L. Genome Res Research Half the human genome is made of transposable elements (TEs), whose ongoing activity continues to impact our genome. LINE-1 (or L1) is an autonomous non-LTR retrotransposon in the human genome, comprising 17% of its genomic mass and containing an average of 80–100 active L1s per average genome that provide a source of inter-individual variation. New LINE-1 insertions are thought to accumulate mostly during human embryogenesis. Surprisingly, the activity of L1s can further impact the somatic human brain genome. However, it is currently unknown whether L1 can retrotranspose in other somatic healthy tissues or if L1 mobilization is restricted to neuronal precursor cells (NPCs) in the human brain. Here, we took advantage of an engineered L1 retrotransposition assay to analyze L1 mobilization rates in human mesenchymal (MSCs) and hematopoietic (HSCs) somatic stem cells. Notably, we have observed that L1 expression and engineered retrotransposition is much lower in both MSCs and HSCs when compared to NPCs. Remarkably, we have further demonstrated for the first time that engineered L1s can retrotranspose efficiently in mature nondividing neuronal cells. Thus, these findings suggest that the degree of somatic mosaicism and the impact of L1 retrotransposition in the human brain is likely much higher than previously thought. Cold Spring Harbor Laboratory Press 2017-03 /pmc/articles/PMC5340962/ /pubmed/27965292 http://dx.doi.org/10.1101/gr.206805.116 Text en © 2017 Macia et al.; Published by Cold Spring Harbor Laboratory Press http://creativecommons.org/licenses/by-nc/4.0/ This article is distributed exclusively by Cold Spring Harbor Laboratory Press for the first six months after the full-issue publication date (see http://genome.cshlp.org/site/misc/terms.xhtml). After six months, it is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/. |
spellingShingle | Research Macia, Angela Widmann, Thomas J. Heras, Sara R. Ayllon, Veronica Sanchez, Laura Benkaddour-Boumzaouad, Meriem Muñoz-Lopez, Martin Rubio, Alejandro Amador-Cubero, Suyapa Blanco-Jimenez, Eva Garcia-Castro, Javier Menendez, Pablo Ng, Philip Muotri, Alysson R. Goodier, John L. Garcia-Perez, Jose L. Engineered LINE-1 retrotransposition in nondividing human neurons |
title | Engineered LINE-1 retrotransposition in nondividing human neurons |
title_full | Engineered LINE-1 retrotransposition in nondividing human neurons |
title_fullStr | Engineered LINE-1 retrotransposition in nondividing human neurons |
title_full_unstemmed | Engineered LINE-1 retrotransposition in nondividing human neurons |
title_short | Engineered LINE-1 retrotransposition in nondividing human neurons |
title_sort | engineered line-1 retrotransposition in nondividing human neurons |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5340962/ https://www.ncbi.nlm.nih.gov/pubmed/27965292 http://dx.doi.org/10.1101/gr.206805.116 |
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