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Mutational load and mutational patterns in relation to age in head and neck cancer
Head and neck squamous cell carcinoma (HNSCC) is a cancer with well-defined tumor causes such as HPV infection, smoking and drinking.Using The Cancer Genome Atlas (TCGA) HNSCC cohort we systematically studied the mutational load as well as patterns related to patient age in HNSCC. To obtain a homoge...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5342469/ https://www.ncbi.nlm.nih.gov/pubmed/27596625 http://dx.doi.org/10.18632/oncotarget.11312 |
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author | Meucci, Stefano Keilholz, Ulrich Tinhofer, Ingeborg Ebner, Oliva A. |
author_facet | Meucci, Stefano Keilholz, Ulrich Tinhofer, Ingeborg Ebner, Oliva A. |
author_sort | Meucci, Stefano |
collection | PubMed |
description | Head and neck squamous cell carcinoma (HNSCC) is a cancer with well-defined tumor causes such as HPV infection, smoking and drinking.Using The Cancer Genome Atlas (TCGA) HNSCC cohort we systematically studied the mutational load as well as patterns related to patient age in HNSCC. To obtain a homogenous set we excluded all patients with HPV infection as well as wild type TP53. We found that the overall mutational load is higher in patients of old age. Through unsupervised hierarchical clustering, we detected distinct mutational clusters in very young as well as very old patients. In the group of old patients, we identified four enriched pathways (“Axon Guidance”, “ECM-Receptor Interaction”, “Focal Adhesion” and “Notch Signaling”) that are only sporadically mutated in the other age groups. Our findings indicate that the four pathways regulate cell motility, tumor invasion and angiogenesis supposedly leading to less aggressive tumors in older age patients. Importantly, we did not see a strict pattern of genes always mutated in older age but rather an accumulation of mutations in the same pathways. Our study provides indications of age-dependent differences in mutational backgrounds of tumors that might be relevant for treatment approaches of HNSCCs patients. |
format | Online Article Text |
id | pubmed-5342469 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-53424692017-03-24 Mutational load and mutational patterns in relation to age in head and neck cancer Meucci, Stefano Keilholz, Ulrich Tinhofer, Ingeborg Ebner, Oliva A. Oncotarget Research Paper: Gerotarget (Focus on Aging) Head and neck squamous cell carcinoma (HNSCC) is a cancer with well-defined tumor causes such as HPV infection, smoking and drinking.Using The Cancer Genome Atlas (TCGA) HNSCC cohort we systematically studied the mutational load as well as patterns related to patient age in HNSCC. To obtain a homogenous set we excluded all patients with HPV infection as well as wild type TP53. We found that the overall mutational load is higher in patients of old age. Through unsupervised hierarchical clustering, we detected distinct mutational clusters in very young as well as very old patients. In the group of old patients, we identified four enriched pathways (“Axon Guidance”, “ECM-Receptor Interaction”, “Focal Adhesion” and “Notch Signaling”) that are only sporadically mutated in the other age groups. Our findings indicate that the four pathways regulate cell motility, tumor invasion and angiogenesis supposedly leading to less aggressive tumors in older age patients. Importantly, we did not see a strict pattern of genes always mutated in older age but rather an accumulation of mutations in the same pathways. Our study provides indications of age-dependent differences in mutational backgrounds of tumors that might be relevant for treatment approaches of HNSCCs patients. Impact Journals LLC 2016-08-16 /pmc/articles/PMC5342469/ /pubmed/27596625 http://dx.doi.org/10.18632/oncotarget.11312 Text en Copyright: © 2016 Meucci et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper: Gerotarget (Focus on Aging) Meucci, Stefano Keilholz, Ulrich Tinhofer, Ingeborg Ebner, Oliva A. Mutational load and mutational patterns in relation to age in head and neck cancer |
title | Mutational load and mutational patterns in relation to age in head and neck cancer |
title_full | Mutational load and mutational patterns in relation to age in head and neck cancer |
title_fullStr | Mutational load and mutational patterns in relation to age in head and neck cancer |
title_full_unstemmed | Mutational load and mutational patterns in relation to age in head and neck cancer |
title_short | Mutational load and mutational patterns in relation to age in head and neck cancer |
title_sort | mutational load and mutational patterns in relation to age in head and neck cancer |
topic | Research Paper: Gerotarget (Focus on Aging) |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5342469/ https://www.ncbi.nlm.nih.gov/pubmed/27596625 http://dx.doi.org/10.18632/oncotarget.11312 |
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