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Whole Exome Sequencing in Psoriasis Patients Contributes to Studies of Acitretin Treatment Difference
Psoriasis vulgaris is an immune-mediated inflammatory skin disease. Although acitretin is a widely used synthetic retinoid for moderate to severe psoriasis, little is known about patients’ genetics in response to this drug. In this study, 179 patients were enrolled in either the discovery set (13 pa...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5343831/ https://www.ncbi.nlm.nih.gov/pubmed/28146080 http://dx.doi.org/10.3390/ijms18020295 |
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author | Zhou, Xingchen He, Yijing Kuang, Yehong Li, Jie Zhang, Jianglin Chen, Mingliang Chen, Wangqing Su, Juan Zhao, Shuang Liu, Panpan Chen, Menglin Shen, Minxue Chen, Xiaoping Zhu, Wu Chen, Xiang |
author_facet | Zhou, Xingchen He, Yijing Kuang, Yehong Li, Jie Zhang, Jianglin Chen, Mingliang Chen, Wangqing Su, Juan Zhao, Shuang Liu, Panpan Chen, Menglin Shen, Minxue Chen, Xiaoping Zhu, Wu Chen, Xiang |
author_sort | Zhou, Xingchen |
collection | PubMed |
description | Psoriasis vulgaris is an immune-mediated inflammatory skin disease. Although acitretin is a widely used synthetic retinoid for moderate to severe psoriasis, little is known about patients’ genetics in response to this drug. In this study, 179 patients were enrolled in either the discovery set (13 patients) or replication set (166 patients). The discovery set was sequenced by whole exome sequencing and sequential validation was conducted in the replication set by MassArray assays. Four SNPs (single nucleotide polymorphisms) (rs1105223T>C in CRB2, rs11086065A>G in ANKLE1, rs3821414T>C in ARHGEF3, rs1802073 T>G in SFRP4) were found to be significantly associated with acitretin response in either co-dominant or dominant models via multivariable logistic regression analysis, while CRB2 rs1105223CC (OR = 4.10, 95% CI = 1.46–11.5, p = 0.007) and ANKLE1 rs11086065AG/GG (OR = 2.76, 95% CI = 1.42–5.37, p = 0.003) were associated with no response to acitretin after 8-week treatment. Meanwhile, ARHGEF3 rs3821414CT/CC (OR = 0.25, 95% CI = 0.10–0.68, p = 0.006) and SFRP4 rs1802073GG/GT (OR = 2.40, 95% CI, 1.23–4.70, p = 0.011) were associated with a higher response rate. Four new genetic variations with potential influences on the response to acitretin were found in this study which may serve as genetic markers for acitretin in psoriasis patients. |
format | Online Article Text |
id | pubmed-5343831 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-53438312017-03-16 Whole Exome Sequencing in Psoriasis Patients Contributes to Studies of Acitretin Treatment Difference Zhou, Xingchen He, Yijing Kuang, Yehong Li, Jie Zhang, Jianglin Chen, Mingliang Chen, Wangqing Su, Juan Zhao, Shuang Liu, Panpan Chen, Menglin Shen, Minxue Chen, Xiaoping Zhu, Wu Chen, Xiang Int J Mol Sci Article Psoriasis vulgaris is an immune-mediated inflammatory skin disease. Although acitretin is a widely used synthetic retinoid for moderate to severe psoriasis, little is known about patients’ genetics in response to this drug. In this study, 179 patients were enrolled in either the discovery set (13 patients) or replication set (166 patients). The discovery set was sequenced by whole exome sequencing and sequential validation was conducted in the replication set by MassArray assays. Four SNPs (single nucleotide polymorphisms) (rs1105223T>C in CRB2, rs11086065A>G in ANKLE1, rs3821414T>C in ARHGEF3, rs1802073 T>G in SFRP4) were found to be significantly associated with acitretin response in either co-dominant or dominant models via multivariable logistic regression analysis, while CRB2 rs1105223CC (OR = 4.10, 95% CI = 1.46–11.5, p = 0.007) and ANKLE1 rs11086065AG/GG (OR = 2.76, 95% CI = 1.42–5.37, p = 0.003) were associated with no response to acitretin after 8-week treatment. Meanwhile, ARHGEF3 rs3821414CT/CC (OR = 0.25, 95% CI = 0.10–0.68, p = 0.006) and SFRP4 rs1802073GG/GT (OR = 2.40, 95% CI, 1.23–4.70, p = 0.011) were associated with a higher response rate. Four new genetic variations with potential influences on the response to acitretin were found in this study which may serve as genetic markers for acitretin in psoriasis patients. MDPI 2017-01-29 /pmc/articles/PMC5343831/ /pubmed/28146080 http://dx.doi.org/10.3390/ijms18020295 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zhou, Xingchen He, Yijing Kuang, Yehong Li, Jie Zhang, Jianglin Chen, Mingliang Chen, Wangqing Su, Juan Zhao, Shuang Liu, Panpan Chen, Menglin Shen, Minxue Chen, Xiaoping Zhu, Wu Chen, Xiang Whole Exome Sequencing in Psoriasis Patients Contributes to Studies of Acitretin Treatment Difference |
title | Whole Exome Sequencing in Psoriasis Patients Contributes to Studies of Acitretin Treatment Difference |
title_full | Whole Exome Sequencing in Psoriasis Patients Contributes to Studies of Acitretin Treatment Difference |
title_fullStr | Whole Exome Sequencing in Psoriasis Patients Contributes to Studies of Acitretin Treatment Difference |
title_full_unstemmed | Whole Exome Sequencing in Psoriasis Patients Contributes to Studies of Acitretin Treatment Difference |
title_short | Whole Exome Sequencing in Psoriasis Patients Contributes to Studies of Acitretin Treatment Difference |
title_sort | whole exome sequencing in psoriasis patients contributes to studies of acitretin treatment difference |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5343831/ https://www.ncbi.nlm.nih.gov/pubmed/28146080 http://dx.doi.org/10.3390/ijms18020295 |
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