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Whole Exome Sequencing in Psoriasis Patients Contributes to Studies of Acitretin Treatment Difference

Psoriasis vulgaris is an immune-mediated inflammatory skin disease. Although acitretin is a widely used synthetic retinoid for moderate to severe psoriasis, little is known about patients’ genetics in response to this drug. In this study, 179 patients were enrolled in either the discovery set (13 pa...

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Autores principales: Zhou, Xingchen, He, Yijing, Kuang, Yehong, Li, Jie, Zhang, Jianglin, Chen, Mingliang, Chen, Wangqing, Su, Juan, Zhao, Shuang, Liu, Panpan, Chen, Menglin, Shen, Minxue, Chen, Xiaoping, Zhu, Wu, Chen, Xiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5343831/
https://www.ncbi.nlm.nih.gov/pubmed/28146080
http://dx.doi.org/10.3390/ijms18020295
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author Zhou, Xingchen
He, Yijing
Kuang, Yehong
Li, Jie
Zhang, Jianglin
Chen, Mingliang
Chen, Wangqing
Su, Juan
Zhao, Shuang
Liu, Panpan
Chen, Menglin
Shen, Minxue
Chen, Xiaoping
Zhu, Wu
Chen, Xiang
author_facet Zhou, Xingchen
He, Yijing
Kuang, Yehong
Li, Jie
Zhang, Jianglin
Chen, Mingliang
Chen, Wangqing
Su, Juan
Zhao, Shuang
Liu, Panpan
Chen, Menglin
Shen, Minxue
Chen, Xiaoping
Zhu, Wu
Chen, Xiang
author_sort Zhou, Xingchen
collection PubMed
description Psoriasis vulgaris is an immune-mediated inflammatory skin disease. Although acitretin is a widely used synthetic retinoid for moderate to severe psoriasis, little is known about patients’ genetics in response to this drug. In this study, 179 patients were enrolled in either the discovery set (13 patients) or replication set (166 patients). The discovery set was sequenced by whole exome sequencing and sequential validation was conducted in the replication set by MassArray assays. Four SNPs (single nucleotide polymorphisms) (rs1105223T>C in CRB2, rs11086065A>G in ANKLE1, rs3821414T>C in ARHGEF3, rs1802073 T>G in SFRP4) were found to be significantly associated with acitretin response in either co-dominant or dominant models via multivariable logistic regression analysis, while CRB2 rs1105223CC (OR = 4.10, 95% CI = 1.46–11.5, p = 0.007) and ANKLE1 rs11086065AG/GG (OR = 2.76, 95% CI = 1.42–5.37, p = 0.003) were associated with no response to acitretin after 8-week treatment. Meanwhile, ARHGEF3 rs3821414CT/CC (OR = 0.25, 95% CI = 0.10–0.68, p = 0.006) and SFRP4 rs1802073GG/GT (OR = 2.40, 95% CI, 1.23–4.70, p = 0.011) were associated with a higher response rate. Four new genetic variations with potential influences on the response to acitretin were found in this study which may serve as genetic markers for acitretin in psoriasis patients.
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spelling pubmed-53438312017-03-16 Whole Exome Sequencing in Psoriasis Patients Contributes to Studies of Acitretin Treatment Difference Zhou, Xingchen He, Yijing Kuang, Yehong Li, Jie Zhang, Jianglin Chen, Mingliang Chen, Wangqing Su, Juan Zhao, Shuang Liu, Panpan Chen, Menglin Shen, Minxue Chen, Xiaoping Zhu, Wu Chen, Xiang Int J Mol Sci Article Psoriasis vulgaris is an immune-mediated inflammatory skin disease. Although acitretin is a widely used synthetic retinoid for moderate to severe psoriasis, little is known about patients’ genetics in response to this drug. In this study, 179 patients were enrolled in either the discovery set (13 patients) or replication set (166 patients). The discovery set was sequenced by whole exome sequencing and sequential validation was conducted in the replication set by MassArray assays. Four SNPs (single nucleotide polymorphisms) (rs1105223T>C in CRB2, rs11086065A>G in ANKLE1, rs3821414T>C in ARHGEF3, rs1802073 T>G in SFRP4) were found to be significantly associated with acitretin response in either co-dominant or dominant models via multivariable logistic regression analysis, while CRB2 rs1105223CC (OR = 4.10, 95% CI = 1.46–11.5, p = 0.007) and ANKLE1 rs11086065AG/GG (OR = 2.76, 95% CI = 1.42–5.37, p = 0.003) were associated with no response to acitretin after 8-week treatment. Meanwhile, ARHGEF3 rs3821414CT/CC (OR = 0.25, 95% CI = 0.10–0.68, p = 0.006) and SFRP4 rs1802073GG/GT (OR = 2.40, 95% CI, 1.23–4.70, p = 0.011) were associated with a higher response rate. Four new genetic variations with potential influences on the response to acitretin were found in this study which may serve as genetic markers for acitretin in psoriasis patients. MDPI 2017-01-29 /pmc/articles/PMC5343831/ /pubmed/28146080 http://dx.doi.org/10.3390/ijms18020295 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhou, Xingchen
He, Yijing
Kuang, Yehong
Li, Jie
Zhang, Jianglin
Chen, Mingliang
Chen, Wangqing
Su, Juan
Zhao, Shuang
Liu, Panpan
Chen, Menglin
Shen, Minxue
Chen, Xiaoping
Zhu, Wu
Chen, Xiang
Whole Exome Sequencing in Psoriasis Patients Contributes to Studies of Acitretin Treatment Difference
title Whole Exome Sequencing in Psoriasis Patients Contributes to Studies of Acitretin Treatment Difference
title_full Whole Exome Sequencing in Psoriasis Patients Contributes to Studies of Acitretin Treatment Difference
title_fullStr Whole Exome Sequencing in Psoriasis Patients Contributes to Studies of Acitretin Treatment Difference
title_full_unstemmed Whole Exome Sequencing in Psoriasis Patients Contributes to Studies of Acitretin Treatment Difference
title_short Whole Exome Sequencing in Psoriasis Patients Contributes to Studies of Acitretin Treatment Difference
title_sort whole exome sequencing in psoriasis patients contributes to studies of acitretin treatment difference
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5343831/
https://www.ncbi.nlm.nih.gov/pubmed/28146080
http://dx.doi.org/10.3390/ijms18020295
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